Detailed information NTG0036164

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSNT_RS14065
• Genome accession: NC_017196
• Coordinates: 2594869..2595474 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. natto BEST195
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2589869..2600474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSNT_RS14035 (BSNT_04017)	-	2590682..2591071 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
BSNT_RS14040 (BSNT_04018)	yajC	2591128..2591394 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSNT_RS14045 (BSNT_04019)	tgt	2591431..2592576 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSNT_RS14050 (BSNT_04020)	queA	2592603..2593631 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSNT_RS14055 (BSNT_04021)	yrzS	2593661..2593861 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
BSNT_RS14060 (BSNT_04022)	ruvB	2593854..2594858 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSNT_RS14065 (BSNT_04023)	ruvA	2594869..2595474 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSNT_RS14070 (BSNT_04025)	bofC	2595613..2596125 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
BSNT_RS14075 (BSNT_04027)	csbX	2596173..2597480 (-)	1308	WP_014480439.1	MFS transporter	-
BSNT_RS14080 (BSNT_04029)	iolG	2597551..2598576 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
BSNT_RS14085 (BSNT_04032)	yrzF	2598814..2599461 (+)	648	WP_014480441.1	phosphotransferase	-
BSNT_RS22850 (BSNT_04034)	-	2599507..2599629 (-)	123	WP_003229707.1	hypothetical protein	-
BSNT_RS23420	-	2599714..2599788 (+)	75	Protein_2722	hypothetical protein	-
BSNT_RS22855 (BSNT_04035)	-	2599792..2600160 (+)	369	WP_186437837.1	DUF5412 family protein	-
BSNT_RS14100 (BSNT_04037)	-	2600167..2600307 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=36164 BSNT_RS14065 WP_003229717.1 2594869..2595474(-) (ruvA) [Bacillus subtilis subsp. natto BEST195]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=36164 BSNT_RS14065 WP_003229717.1 2594869..2595474(-) (ruvA) [Bacillus subtilis subsp. natto BEST195]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408