Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   FAH67_RS10520 Genome accession   NZ_CP039886
Coordinates   2057284..2057979 (+) Length   231 a.a.
NCBI ID   WP_003679275.1    Uniprot ID   C0EKB4
Organism   Neisseria flavescens strain ATCC 13120     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2052284..2062979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAH67_RS10485 (FAH67_10485) rlmH 2052367..2052837 (+) 471 WP_003682681.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FAH67_RS10490 (FAH67_10490) pyrE 2052983..2053624 (+) 642 WP_003682682.1 orotate phosphoribosyltransferase -
  FAH67_RS10495 (FAH67_10495) - 2053724..2054119 (+) 396 WP_039864455.1 MJ0042-type zinc finger domain-containing protein -
  FAH67_RS10500 (FAH67_10500) argA 2054116..2055429 (+) 1314 WP_003682686.1 amino-acid N-acetyltransferase -
  FAH67_RS10505 (FAH67_10505) - 2055475..2056254 (+) 780 WP_003682689.1 exodeoxyribonuclease III -
  FAH67_RS10510 (FAH67_10510) - 2056241..2056585 (+) 345 WP_003682692.1 hypothetical protein -
  FAH67_RS10515 (FAH67_10515) - 2056596..2057126 (+) 531 WP_115287665.1 alpha/beta hydrolase -
  FAH67_RS10520 (FAH67_10520) dsbA2 2057284..2057979 (+) 696 WP_003679275.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  FAH67_RS10525 (FAH67_10525) ffh 2058148..2059518 (-) 1371 WP_003679277.1 signal recognition particle protein -
  FAH67_RS10530 (FAH67_10530) ccsA 2059704..2060517 (+) 814 Protein_2014 cytochrome c biogenesis protein CcsA -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25300.74 Da        Isoelectric Point: 5.3625

>NTDB_id=360916 FAH67_RS10520 WP_003679275.1 2057284..2057979(+) (dsbA2) [Neisseria flavescens strain ATCC 13120]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASASAAPAPLTEGVNYTVLSTPIPQQQTGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEIAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=360916 FAH67_RS10520 WP_003679275.1 2057284..2057979(+) (dsbA2) [Neisseria flavescens strain ATCC 13120]
ATGAAACTGAAAACTTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAGCGCATCTGCTTCGGCAGCGCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAACAGACCGGTAAAGTCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATTTGGAGCCGGTTTTGAGCGAACACACCAAAACGTTCAAAGACGATACCTACCTGCGTCGCGAGCATGTGATTTGGGG
CGACGAAATGAAACCTTTGGCACGTTTGGCCGCCGCAGTGGAAATAGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATTTGGCCGATACCGATACCCTGAAAAAATGGTTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTTATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGATTGGCAGTCCGGCATGA
CCACGATTGACCAGTTGGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCACAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0EKB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

94.836

92.208

0.874
  dsbA1 Neisseria meningitidis MC58

70.386

100

0.71

Multiple sequence alignment