Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FAZ90_RS01265 | Genome accession | NZ_CP039700 |
| Coordinates | 268964..269482 (+) | Length | 172 a.a. |
| NCBI ID | WP_016767989.1 | Uniprot ID | A0A7Z1S257 |
| Organism | Vibrio cyclitrophicus strain ECSMB14105 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 263964..274482
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAZ90_RS01245 (FAZ90_01245) | - | 264022..266580 (-) | 2559 | WP_032547293.1 | penicillin-binding protein 1A | - |
| FAZ90_RS01250 (FAZ90_01250) | pilM | 266732..267757 (+) | 1026 | WP_016767986.1 | type IV pilus assembly protein PilM | Machinery gene |
| FAZ90_RS01255 (FAZ90_01255) | pilN | 267741..268355 (+) | 615 | WP_046209435.1 | PilN domain-containing protein | Machinery gene |
| FAZ90_RS01260 (FAZ90_01260) | pilO | 268348..268977 (+) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FAZ90_RS01265 (FAZ90_01265) | pilP | 268964..269482 (+) | 519 | WP_016767989.1 | pilus assembly protein PilP | Machinery gene |
| FAZ90_RS01270 (FAZ90_01270) | pilQ | 269542..271233 (+) | 1692 | WP_046209434.1 | type IV pilus secretin PilQ | Machinery gene |
| FAZ90_RS01275 (FAZ90_01275) | aroK | 271410..271928 (+) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| FAZ90_RS01280 (FAZ90_01280) | aroB | 271953..273041 (+) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19249.39 Da Isoelectric Point: 10.3202
>NTDB_id=360163 FAZ90_RS01265 WP_016767989.1 268964..269482(+) (pilP) [Vibrio cyclitrophicus strain ECSMB14105]
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=360163 FAZ90_RS01265 WP_016767989.1 268964..269482(+) (pilP) [Vibrio cyclitrophicus strain ECSMB14105]
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |