Detailed information NTG0035864

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BAXH7_RS13130
• Genome accession: NC_017191
• Coordinates: 2599958..2600563 (-)
• Length: 201 a.a.
• NCBI ID: WP_003152683.1
• Uniprot ID: A7Z769
• Organism: Bacillus amyloliquefaciens XH7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2594958..2605563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS13095 (BAXH7_02783)	-	2594972..2595628 (-)	657	WP_013353038.1	DUF421 domain-containing protein	-
BAXH7_RS13100 (BAXH7_02784)	-	2595795..2596181 (+)	387	WP_013353039.1	TIGR04086 family membrane protein	-
BAXH7_RS13105 (BAXH7_02785)	yajC	2596234..2596494 (-)	261	WP_003152695.1	preprotein translocase subunit YajC	-
BAXH7_RS13110 (BAXH7_02786)	tgt	2596526..2597668 (-)	1143	WP_014470773.1	tRNA guanosine(34) transglycosylase Tgt	-
BAXH7_RS13115	queA	2597696..2598724 (-)	1029	Protein_2632	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BAXH7_RS13120 (BAXH7_02789)	-	2598750..2598950 (-)	201	WP_013353042.1	DUF2905 domain-containing protein	-
BAXH7_RS13125 (BAXH7_02790)	ruvB	2598943..2599947 (-)	1005	WP_013353043.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BAXH7_RS13130 (BAXH7_02791)	ruvA	2599958..2600563 (-)	606	WP_003152683.1	Holliday junction branch migration protein RuvA	Machinery gene
BAXH7_RS13135 (BAXH7_02792)	-	2600698..2601174 (-)	477	WP_038463270.1	intercompartmental signaling factor BofC	-
BAXH7_RS21565 (BAXH7_02794)	-	2601340..2601459 (-)	120	WP_014470775.1	hypothetical protein	-
BAXH7_RS13140 (BAXH7_02795)	-	2601584..2602177 (-)	594	WP_014470776.1	YhcN/YlaJ family sporulation lipoprotein	-
BAXH7_RS13145 (BAXH7_02796)	safA	2602326..2603477 (-)	1152	WP_014470777.1	spore coat assembly protein SafA	-
BAXH7_RS13150 (BAXH7_02797)	nadA	2603604..2604707 (-)	1104	WP_014470778.1	quinolinate synthase NadA	-
BAXH7_RS13155 (BAXH7_02798)	nadC	2604707..2605555 (-)	849	WP_014470779.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22414.85 Da
• Isoelectric Point: 5.1597

>NTDB_id=35864 BAXH7_RS13130 WP_003152683.1 2599958..2600563(-) (ruvA) [Bacillus amyloliquefaciens XH7]
MIEFVKGTIDYVSPQYIVIENGGIGYQVFTPNPFIYKVSNQETIFTYHHIKEDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIEAIEQEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIDNLFNHEARIEKQEAETALDEAL
EALRVLGYAEKEIKKVLPHLKEETALSTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=35864 BAXH7_RS13130 WP_003152683.1 2599958..2600563(-) (ruvA) [Bacillus amyloliquefaciens XH7]
GTGATTGAATTCGTGAAGGGGACGATTGATTACGTATCGCCCCAATACATCGTGATTGAAAACGGCGGGATCGGCTATCA
GGTCTTCACTCCGAATCCGTTTATTTATAAGGTAAGCAATCAAGAGACCATTTTTACGTATCATCATATAAAAGAAGACG
CCTTTTCTTTGTATGGCTTTTCAACCCGGGAAGAAAAAGCGCTTTTCACAAAGCTGCTGAATGTCACCGGCATCGGTCCG
AAAGGGGCGCTCGCCATTCTCGGTTCCGGTGATCCGGGAGCCGTCATCGAAGCGATCGAACAGGAAGATGAAGCCTTTTT
GGTGAAATTTCCTGGTGTGGGCAAAAAAACGGCACGGCAGATTATTCTTGATTTGAAAGGCAAACTGGCCGATGTCGTGC
CTGAAATGATTGACAACCTGTTCAATCATGAAGCGCGCATTGAAAAACAAGAGGCTGAAACGGCGCTTGATGAGGCGCTT
GAAGCGCTCAGGGTACTCGGCTACGCCGAAAAAGAAATTAAAAAAGTGCTTCCTCACTTAAAAGAGGAAACGGCGCTTTC
AACAGACCAATATGTGAAAAAAGCATTGCAAAAATTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: A7Z769

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	92.537	100	0.925
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408