Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   BAXH7_RS08995 Genome accession   NC_017191
Coordinates   1828836..1830779 (-) Length   647 a.a.
NCBI ID   WP_014470409.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens XH7     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1823836..1835779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS08965 (BAXH7_01878) - 1825510..1825872 (-) 363 WP_013352224.1 Asp23/Gls24 family envelope stress response protein -
  BAXH7_RS08970 (BAXH7_01879) rpmB 1826132..1826320 (+) 189 WP_003154328.1 50S ribosomal protein L28 -
  BAXH7_RS08975 spoVM 1826397..1826477 (-) 81 WP_003154329.1 stage V sporulation protein SpoVM -
  BAXH7_RS08980 (BAXH7_01881) - 1826564..1827208 (-) 645 WP_013352223.1 thiamine diphosphokinase -
  BAXH7_RS08985 (BAXH7_01882) rpe 1827276..1827929 (-) 654 WP_014470407.1 ribulose-phosphate 3-epimerase -
  BAXH7_RS08990 (BAXH7_01883) rsgA 1827931..1828821 (-) 891 WP_014470408.1 ribosome small subunit-dependent GTPase A -
  BAXH7_RS08995 (BAXH7_01884) stkP 1828836..1830779 (-) 1944 WP_014470409.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  BAXH7_RS09000 (BAXH7_01885) - 1830773..1831534 (-) 762 WP_014470410.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  BAXH7_RS09005 (BAXH7_01886) rlmN 1831540..1832631 (-) 1092 WP_014470411.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BAXH7_RS09010 (BAXH7_01887) rsmB 1832635..1833978 (-) 1344 WP_013352217.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BAXH7_RS09015 (BAXH7_01888) fmt 1833965..1834918 (-) 954 WP_013352216.1 methionyl-tRNA formyltransferase -
  BAXH7_RS09020 (BAXH7_01889) def 1834923..1835405 (-) 483 WP_013352215.1 peptide deformylase -

Sequence


Protein


Download         Length: 647 a.a.        Molecular weight: 71542.16 Da        Isoelectric Point: 4.9805

>NTDB_id=35821 BAXH7_RS08995 WP_014470409.1 1828836..1830779(-) (stkP) [Bacillus amyloliquefaciens XH7]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYITAHGPLHPKEALSVMEQIVSAIAHAHHNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKMPFDGESAVSIALKHLQAETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDGAIAAPQAETPAETDDKEQPSA
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKEVSVPDVRGMKYEKAEALLEKNGLQADPDMTDIEDEKIEEGLMV
KTDPKAGSAVKEGSSVKLYKSIGKPKTRLIDVKGRPIDDAKKTLKDKGFKHVNVKEENDDSAAGTVIDQNPSAGTDMVAS
DDEVSLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKEAHSDDVPEGQVMKQEPSAGTAVKPGSDVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVVSYKTI
EYPKDND

Nucleotide


Download         Length: 1944 bp        

>NTDB_id=35821 BAXH7_RS08995 WP_014470409.1 1828836..1830779(-) (stkP) [Bacillus amyloliquefaciens XH7]
GTGCTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCGAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAGATTCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTTGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGACATTTATTATATTGTCATGGAATATGTGGAAGGCATGACGTTAAAGGAATACATAACCGCACACGGACCGCTTCA
TCCGAAAGAAGCGCTGTCTGTTATGGAGCAGATCGTCTCAGCCATCGCCCATGCCCATCATAACCATATCGTGCACCGGG
ATATCAAACCGCACAATATTTTGATAGATCATTTAGGACATATTAAGGTGACGGATTTCGGCATCGCCACAGCTCTCACT
TCGACGACAATCACACATACGAATTCTGTGCTCGGCTCGGTTCATTATTTGTCTCCGGAGCAGGCGAGAGGCGGTCTGGC
AACGAAAAAATCGGATATTTACGCGCTCGGCATCGTGCTGTTTGAGCTTTTAACAGGCAAAATGCCTTTTGACGGAGAAT
CAGCCGTCAGCATTGCGTTAAAGCACCTGCAAGCAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTGGAAAACATTATTTTAAAGGCAACCGCCAAAGACCCGTTTCACCGCTATGAAAGCGCAGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTCTCCGTGCAGGATGATGAGGAAATGACGAAAGCGATTC
CCGTTATTACTGACGGTGCGATAGCCGCGCCGCAGGCGGAAACGCCGGCAGAGACGGATGATAAAGAACAGCCGTCCGCC
AAAAAGAAGAAACGGAAATGGCCGTGGGTTTTGCTGGCTGTCTGCTTTATTTTCATAATGGCGGCTGTTCTTGCGGTCAC
CGTGTTCCCGTCTTTGTTTATGCCAAAAGAGGTAAGCGTCCCCGATGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGCCTCCAAGCGGATCCTGATATGACGGACATTGAAGATGAAAAAATCGAAGAGGGATTAATGGTC
AAAACTGATCCGAAAGCGGGTTCTGCCGTTAAAGAAGGCTCTTCTGTAAAACTGTACAAAAGCATCGGGAAACCGAAAAC
CCGGCTGATTGACGTGAAAGGCCGGCCGATCGATGATGCGAAAAAAACGCTTAAGGATAAAGGCTTCAAACATGTCAATG
TAAAAGAAGAGAACGATGACAGTGCGGCTGGCACTGTAATTGATCAGAACCCATCAGCCGGCACCGACATGGTCGCAAGT
GATGATGAAGTCAGCTTAACAGTCAGCCTCGGACCGGCGGACGTTACGCTGAGAGACTTAAAAACATACAGCAAAGAAGC
GGCTTCCGGGTATCTTGAAGATAACGGCCTGCAGCTTGTTGAAAAGGAAGCTCACTCAGATGACGTGCCTGAGGGACAGG
TCATGAAGCAAGAGCCGTCAGCCGGCACTGCGGTTAAGCCGGGAAGTGATGTTGAAGTAACGTTTTCGCTCGGGCCTGAA
GAAAAACCGGCCAAAACGGTAAAAGAAAAAATCAGCATCCCCTACGAACCCGAACATGAAGGGGACGAGCTCGAAGTGCA
AATCGCCATCGATGATAAAGACCACAGCATCTCTGATACGTATGATTCGTTTAAAATAAAAGAACCGACTGAAAAAACAA
TTGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTCGTCAGCTACAAAACGATT
GAATACCCGAAAGATAATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

38.636

95.209

0.368

  stkP Streptococcus pneumoniae D39

38.312

95.209

0.365

  stkP Streptococcus pneumoniae R6

38.312

95.209

0.365

  stkP Streptococcus pneumoniae Rx1

38.149

95.209

0.363


Multiple sequence alignment