Detailed information NTG0357740

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: E6P07_RS07470
• Genome accession: NZ_CP039268
• Coordinates: 1632042..1633370 (-)
• Length: 442 a.a.
• NCBI ID: WP_153975028.1
• Uniprot ID: -
• Organism: Thermochromatium tepidum ATCC 43061
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1627042..1638370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E6P07_RS07450 (E6P07_07450)	-	1627216..1629690 (+)	2475	WP_153975025.1	penicillin acylase family protein	-
E6P07_RS07455 (E6P07_07455)	-	1629801..1629944 (-)	144	WP_343031224.1	hypothetical protein	-
E6P07_RS07460 (E6P07_07460)	-	1630279..1631307 (+)	1029	WP_153975026.1	PilZ domain-containing protein	-
E6P07_RS07465 (E6P07_07465)	-	1631367..1632038 (+)	672	WP_162008616.1	PilZ domain-containing protein	-
E6P07_RS07470 (E6P07_07470)	pilR	1632042..1633370 (-)	1329	WP_153975028.1	sigma-54 dependent transcriptional regulator	Regulator
E6P07_RS07480 (E6P07_07480)	-	1633897..1635711 (-)	1815	WP_153975029.1	magnesium chelatase subunit D	-
E6P07_RS07485 (E6P07_07485)	bchI	1635708..1636736 (-)	1029	WP_153975030.1	magnesium chelatase ATPase subunit I	-
E6P07_RS07490 (E6P07_07490)	-	1636982..1638253 (+)	1272	WP_153975031.1	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain	-

Sequence

Protein

• Length: 442 a.a.
• Molecular weight: 48409.92 Da
• Isoelectric Point: 6.9630

>NTDB_id=357740 E6P07_RS07470 WP_153975028.1 1632042..1633370(-) (pilR) [Thermochromatium tepidum ATCC 43061]
MSRPLVLAVDDEADLLELIRITLGRMDVSAVTASTVAEAKLQLERHRPDLCLTDLCLPDGTGLDLLRYINAHYPELPVAM
ITAHGNMESAVAAMKAGAFDFVAKPVDLSALRNLVESALRLRGRAITTEARSGSEPPLLGDSPAMQQIRTLIAKLARTQA
PVFITGESGTGKELAARLIHAQGPRRDGPFVPVNCGAIPHDLVESELFGHKKGSFTGAVTDKEGLFQAAAGGTLFLDELA
DLPLSAQVKLLRAIQEKSVRPVGAAREVPVNVRLISASHRDLAREVEEGRFRQDLFYRINVIELRLPPLRERPEDIRPLA
THILRKLSPMAVGTVAPRLSEEAMAALMRYSFPGNVRELENILERALALCEGECIEVKDLYLPTNEERLNMLVPVGSART
ALDQAHSNQAAARTLGMTPLAFEYSLARLGIEDRSRRLWRKT

Nucleotide

• Length: 1329 bp

>NTDB_id=357740 E6P07_RS07470 WP_153975028.1 1632042..1633370(-) (pilR) [Thermochromatium tepidum ATCC 43061]
ATGTCCAGACCCTTGGTGCTCGCGGTCGACGACGAAGCCGATCTACTCGAGCTGATCCGCATCACGCTTGGGCGCATGGA
CGTGTCAGCGGTGACGGCCTCGACGGTCGCCGAGGCCAAGCTCCAACTGGAGCGCCATCGCCCCGACCTCTGTCTCACCG
ACCTCTGTCTGCCGGACGGGACCGGACTTGACCTGCTGCGCTATATCAATGCCCATTATCCAGAACTGCCGGTGGCCATG
ATCACAGCCCACGGCAACATGGAATCAGCCGTCGCCGCGATGAAGGCCGGGGCCTTCGATTTCGTCGCCAAGCCGGTCGA
TCTTTCGGCCCTGCGCAACCTCGTCGAGTCGGCGCTCAGACTGCGCGGACGGGCAATCACTACCGAAGCGCGTTCCGGGT
CAGAGCCACCCCTGCTTGGCGACTCGCCAGCGATGCAGCAGATTCGTACCCTGATCGCCAAGCTTGCCCGCACCCAGGCG
CCTGTCTTCATCACCGGTGAGAGCGGTACGGGCAAGGAGTTGGCCGCGCGTCTGATCCATGCCCAGGGGCCGCGCCGTGA
CGGCCCCTTTGTGCCGGTCAACTGCGGGGCCATTCCGCACGACCTGGTCGAAAGCGAGTTATTCGGGCACAAGAAGGGCA
GTTTCACCGGCGCGGTGACCGACAAGGAGGGCCTGTTCCAGGCCGCCGCCGGTGGAACGCTCTTCCTCGACGAACTGGCC
GACCTGCCCCTTTCGGCCCAGGTCAAGCTGCTGCGCGCCATCCAAGAGAAGAGCGTGCGTCCGGTTGGCGCGGCGCGCGA
GGTCCCGGTCAATGTGCGGCTCATCAGCGCCAGTCATCGCGATCTGGCGCGGGAGGTCGAGGAGGGGCGCTTTCGGCAGG
ATCTCTTTTATCGGATCAATGTCATCGAGCTACGCTTACCGCCCCTGCGCGAGCGACCCGAGGACATCCGCCCACTGGCG
ACCCATATCTTGCGAAAACTCAGCCCGATGGCTGTGGGGACAGTCGCCCCGAGGCTCTCGGAGGAGGCCATGGCCGCGCT
CATGCGTTATTCCTTCCCAGGTAATGTGCGCGAACTCGAAAACATCCTGGAGCGCGCCCTGGCCTTGTGCGAGGGCGAGT
GCATCGAGGTCAAGGATCTCTATCTGCCCACCAACGAGGAGCGCCTCAACATGCTTGTGCCCGTGGGGTCGGCGCGCACG
GCACTTGATCAGGCACATTCGAATCAGGCCGCCGCTCGCACGCTCGGCATGACGCCGCTGGCGTTCGAATATAGCCTGGC
CAGACTCGGGATCGAGGACAGGTCAAGACGGCTTTGGCGCAAAACTTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	55.677	100	0.577
pilR	Acinetobacter baumannii strain A118	46.822	100	0.5
luxO	Vibrio cholerae strain A1552	41.912	92.308	0.387