Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5677_RS01715 Genome accession   NZ_CP039251
Coordinates   405973..406350 (+) Length   125 a.a.
NCBI ID   WP_021813722.1    Uniprot ID   A0A2A2B3S9
Organism   Psychrobacter sp. PAMC27889     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 400973..411350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5677_RS01705 (E5677_01705) - 403000..403722 (-) 723 WP_062845432.1 response regulator transcription factor -
  E5677_RS01710 (E5677_01710) - 404021..405271 (-) 1251 WP_062846007.1 HlyD family efflux transporter periplasmic adaptor subunit -
  E5677_RS01715 (E5677_01715) pilG 405973..406350 (+) 378 WP_021813722.1 twitching motility response regulator PilG Regulator
  E5677_RS01720 (E5677_01720) - 406602..406964 (+) 363 WP_062845430.1 response regulator -
  E5677_RS01725 (E5677_01725) - 406968..407498 (+) 531 WP_062845429.1 chemotaxis protein CheW -
  E5677_RS01730 (E5677_01730) - 408015..409085 (+) 1071 Protein_330 methyl-accepting chemotaxis protein -
  E5677_RS01735 (E5677_01735) - 409199..410152 (+) 954 WP_228139865.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=357614 E5677_RS01715 WP_021813722.1 405973..406350(+) (pilG) [Psychrobacter sp. PAMC27889]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=357614 E5677_RS01715 WP_021813722.1 405973..406350(+) (pilG) [Psychrobacter sp. PAMC27889]
ATGGAAAATAATTTTGATGGCTTAAAAGTAATGGTGATTGATGATTCAAAAACCATTCGCCGTACCGCAGAAACCTTGTT
ACAAAAAGCAGGTTGTGAAGTAGTGACCGCAATTGATGGTTTTGATGCTTTAGCGAAAATCGTTGATAACAATCCAGATA
TTATTTTTGTCGACATCATGATGCCGCGTTTAGATGGCTATCAAACATGTGCATTAATAAAGAACAATCCAGATTATGCC
AACAAACCAGTCATTATGTTGTCGTCTAAAGATGGTTTGTTTGACAAAGCAAGAGGCCGTATTGTTGGATCTGATGAGTA
TTTGACCAAGCCATTTAGTAAAGATGAGTTGTTTGAGGCAATTAACCAGTACCGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A2B3S9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376

Multiple sequence alignment