Detailed information NTG0357594

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GR129_RS12170
• Genome accession: NZ_CP047144
• Coordinates: 2782631..2783917 (-)
• Length: 428 a.a.
• NCBI ID: WP_145490443.1
• Uniprot ID: -
• Organism: Streptomyces sp. HF10
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2777631..2788917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR129_RS12160 (GR129_12160)	-	2778759..2781383 (-)	2625	WP_159701335.1	valine--tRNA ligase	-
GR129_RS12165 (GR129_12165)	-	2781521..2782522 (+)	1002	WP_159701338.1	hypothetical protein	-
GR129_RS12170 (GR129_12170)	clpX	2782631..2783917 (-)	1287	WP_145490443.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GR129_RS12175 (GR129_12175)	-	2784087..2784751 (-)	665	Protein_2432	ATP-dependent Clp protease proteolytic subunit	-
GR129_RS12180 (GR129_12180)	clpP	2784821..2785426 (-)	606	WP_085568519.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR129_RS12185 (GR129_12185)	tig	2785802..2787169 (-)	1368	WP_145490439.1	trigger factor	-
GR129_RS12200 (GR129_12200)	-	2787839..2788225 (+)	387	WP_159701340.1	VOC family protein	-
GR129_RS12205 (GR129_12205)	-	2788222..2788860 (+)	639	WP_159701343.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46628.48 Da
• Isoelectric Point: 4.7331

>NTDB_id=357594 GR129_RS12170 WP_145490443.1 2782631..2783917(-) (clpX) [Streptomyces sp. HF10]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGSGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARAGAKGIGFGATILSKRELEAKDVFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=357594 GR129_RS12170 WP_145490443.1 2782631..2783917(-) (clpX) [Streptomyces sp. HF10]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGTCCCGGTGTCTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTGGCCGAGACCA
GCGAGGTGCGCTGGGAGGAGCTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGGGAGCGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCCATCGCCGACGCGACCGCGCTGACGGAGGCGGGCTATGTCGGCGAGGAC
GTGGAGAACATCCTCCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCCGGGACGTCAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCAGGTCTGGAGAAGATCATCGAGGCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCTGTCCAAGCGCGAGCTGGAGGCCAAGGACGTCTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCGGTGATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTGAAGATCCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACCCTGATCCCCCGCGACGCCCGCGGCCGGGGCTCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526