Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   GLX30_RS16110 Genome accession   NZ_CP047140
Coordinates   3668435..3669559 (+) Length   374 a.a.
NCBI ID   WP_005314096.1    Uniprot ID   B5HI61
Organism   Streptomyces sp. Tu 2975     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3663435..3674559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GLX30_RS16095 (GLX30_16180) - 3664166..3664972 (+) 807 WP_159688995.1 hypothetical protein -
  GLX30_RS16100 (GLX30_16185) - 3665081..3666775 (-) 1695 WP_159688997.1 hypothetical protein -
  GLX30_RS16105 (GLX30_16190) radA/sms 3666948..3668390 (+) 1443 WP_159689000.1 DNA repair protein RadA Machinery gene
  GLX30_RS16110 (GLX30_16195) disA 3668435..3669559 (+) 1125 WP_005314096.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  GLX30_RS16115 (GLX30_16200) - 3669640..3670491 (-) 852 WP_159689003.1 hypothetical protein -
  GLX30_RS16120 (GLX30_16205) - 3670667..3671320 (+) 654 WP_159689006.1 phosphatase PAP2 family protein -
  GLX30_RS16125 (GLX30_16210) - 3671540..3672454 (+) 915 WP_159689009.1 A/G-specific adenine glycosylase -
  GLX30_RS16130 (GLX30_16215) - 3672656..3673228 (+) 573 WP_159689012.1 SigE family RNA polymerase sigma factor -
  GLX30_RS16135 (GLX30_16220) - 3673216..3673881 (+) 666 WP_208545427.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40106.88 Da        Isoelectric Point: 4.9483

>NTDB_id=357535 GLX30_RS16110 WP_005314096.1 3668435..3669559(+) (disA) [Streptomyces sp. Tu 2975]
MAAKDGASAPGKSGGGSGNEALIRAALSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALAELDALSHGELLELPTVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=357535 GLX30_RS16110 WP_005314096.1 3668435..3669559(+) (disA) [Streptomyces sp. Tu 2975]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCGCTGATCCGCGCCGCCCT
GAGCGCCGTCGCACCGGGCACCGCCCTGCGTGACGGACTGGAGCGCATCCTCCGGGGCAACACCGGAGGCCTGATCGTTC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAATTCACCGCCACCAGGTTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTCATCCTCGACAAGGACATCTCCAAGATCCACCGGGCCGGCGTGCAGCTGGTCCC
CGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTCTCACGTCAGTGCGGCTTCCCGG
TGGTGTCCGTGTCGCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGAGAGCGCCGGGTCCTCGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCCACGCTCGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACACTGTC
GGCCCTCGAGATCGAGGACCTGGTCACCGTCCGCGACGTCACCGCTGTCGCACAGCGTCTGGAGATGGTGCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGTCTGCTGGCCCTGCAGCTCGACGAGTTGATCGCG
GGTGTCGAGCCGGAGCGCGAACTGGTCGTGCGCGACTACGTACCGGAGCCGACGGCGAAGCGCTCGCGCACCGTGGAGGA
GGCACTCGCGGAGCTGGACGCGCTCAGCCACGGTGAACTCCTCGAACTGCCCACCGTGGCAAGGGCGCTCGGCTACAGCG
GTTCGCCGGAGACGCTCGACTCGGCTGTCTCGCCGCGCGGTTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTCGAGCACTTCGGCGGTCTCCAGAAGCTGCTCGCGGCCAGCGTGGACGACCTTCAGGCGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGCCTGTCGCGGCTCGCGGAGTCCTCGATCCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB B5HI61

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438


Multiple sequence alignment