Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   GQ677_RS02690 Genome accession   NZ_CP047120
Coordinates   505468..507483 (+) Length   671 a.a.
NCBI ID   WP_159330804.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1085     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 500468..512483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ677_RS02670 (GQ677_02670) - 500765..502435 (+) 1671 WP_159330803.1 ABC transporter ATP-binding protein -
  GQ677_RS02675 (GQ677_02675) - 502432..503025 (+) 594 WP_002983234.1 MptD family putative ECF transporter S component -
  GQ677_RS02680 (GQ677_02680) - 503022..503702 (+) 681 WP_002983239.1 energy-coupling factor transporter transmembrane component T -
  GQ677_RS02685 (GQ677_02685) - 503639..505093 (+) 1455 WP_165618963.1 ABC transporter ATP-binding protein -
  GQ677_RS02690 (GQ677_02690) recG/mmsA 505468..507483 (+) 2016 WP_159330804.1 ATP-dependent DNA helicase RecG Machinery gene
  GQ677_RS02695 (GQ677_02695) - 507775..508677 (+) 903 WP_002991995.1 ABC transporter ATP-binding protein -
  GQ677_RS02700 (GQ677_02700) - 508690..509394 (+) 705 WP_002988556.1 ABC transporter permease -
  GQ677_RS02705 (GQ677_02705) - 509743..510708 (-) 966 WP_023078713.1 asparaginase -
  GQ677_RS02710 (GQ677_02710) - 510780..512168 (+) 1389 WP_038434237.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75179.90 Da        Isoelectric Point: 7.0235

>NTDB_id=357293 GQ677_RS02690 WP_159330804.1 505468..507483(+) (recG/mmsA) [Streptococcus pyogenes strain 1085]
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFDLVDGEKAVITGLVVTPANVQYYGFKRNRLS
FKLRQGEAVLNVSFFNQPYLADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQSTLIKAIKSAFE
IDAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEYKQALRRIKFEELFYFQMNLQVLKAENRSETNGLPILYSKH
AMETKISSLPFILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTAGFQSALMVPTEILAEQHYIS
LQELFPDLSIAILTSGMKAAVKRTVLAAIANGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSVIDELPAGRKPIMTRWVKHEQLGTVLEWVKGELQKDAQVYVISPLIEESEALDLKN
AVALHAELSTYFEGIAKVALVHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGHKQSYAVLVANPKTDSGEKRMTIMTETTDGFVLAESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARK
VSAAIVSDPNWIYEKQWQLVAKNIRKKEVYD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=357293 GQ677_RS02690 WP_159330804.1 505468..507483(+) (recG/mmsA) [Streptococcus pyogenes strain 1085]
ATGATATTAACAGCTCCTATGTCCAACTTAAAGGGATTTGGACCAAAATCAGCAGAAAAATTTCAGAAATTAGATATTTA
TACAGTAGAAGATTTACTGCTTTATTATCCGTTTCGCTATGAAGATTTTAAATCAAAATCTGTTTTTGATTTAGTGGATG
GTGAAAAAGCAGTCATTACAGGCTTAGTCGTTACTCCAGCTAATGTACAATATTATGGTTTTAAACGTAACCGTTTAAGT
TTCAAATTGCGTCAAGGGGAAGCTGTCTTAAATGTTAGTTTTTTTAATCAACCCTATTTAGCTGATAAAATAGAACTTGG
TCAAGAGGTAGCTGTTTTTGGTAAATGGGATGCCACTAAATCGGCTATTACTGGGATGAAGGTTTTAGCTCAAGTTGAAG
ATGACATGCAACCTGTTTATCGCGTAGCTCAGGGAATTTCACAGTCTACTTTGATTAAAGCTATTAAGTCAGCTTTTGAA
ATCGATGCGCATTTGGAATTGAAGGAAAATTTACCAGCTACTTTATTGGAAAAATACCGATTGATGGGTCGTAGTCAGGC
TTGTTTAGCTATGCATTTCCCAAAAGATATCACAGAGTATAAGCAAGCGCTCCGTCGGATTAAATTTGAAGAATTATTTT
ACTTTCAAATGAACCTTCAAGTTTTGAAAGCCGAAAATAGATCTGAAACAAATGGTTTGCCTATTCTTTATAGTAAACAT
GCTATGGAGACAAAGATTTCCTCTTTACCCTTTATTCTAACAAATGCTCAAAAGCGCTCTTTAGATGACATATTATCTGA
TATGTCATCGGGAGCTCATATGAATCGTTTATTGCAAGGAGATGTAGGATCAGGAAAGACAGTCATTGCTGGTCTATCAA
TGTATGCAGCTTATACAGCAGGTTTTCAGTCGGCTTTGATGGTTCCAACGGAAATCCTAGCTGAACAACACTACATTAGT
CTGCAAGAGTTATTTCCAGATCTATCAATTGCTATATTAACTTCGGGTATGAAAGCCGCTGTCAAGCGTACGGTTTTAGC
AGCTATTGCAAATGGCTCGGTTGATATGATTGTAGGAACTCATGCTCTTATCCAAGACTCGGTACAGTACCATAAACTGG
GGCTTGTCATTACAGACGAGCAACATCGTTTTGGTGTTAAACAGCGTAGAATTTTCCGTGAAAAGGGAGAAAATCCTGAT
GTTTTAATGATGACAGCCACCCCAATTCCCCGAACTCTAGCAATCACAGCTTTTGGAGAAATGGATGTTTCTGTTATTGA
TGAATTACCTGCCGGTCGTAAACCTATTATGACACGCTGGGTGAAACACGAGCAGCTAGGGACTGTGTTGGAATGGGTAA
AAGGTGAATTGCAAAAAGATGCTCAAGTGTATGTCATTTCACCGTTGATTGAAGAATCAGAAGCTTTAGATTTAAAGAAT
GCAGTAGCATTGCATGCCGAATTATCTACTTATTTTGAAGGAATTGCTAAGGTTGCTCTTGTACATGGACGTATGAAAAA
TGATGAAAAAGATGCCATAATGCAAGATTTCAAGGATAAAAAAAGTCATATTTTAGTATCCACAACAGTTATTGAAGTAG
GGGTAAATGTCCCAAATGCAACGATCATGATTATTATGGATGCCGATCGTTTTGGATTAAGCCAGTTACATCAACTTCGT
GGGCGTGTTGGTCGTGGACATAAACAATCATACGCTGTTTTAGTGGCTAATCCCAAAACGGATTCGGGGGAAAAACGAAT
GACAATCATGACAGAAACGACAGATGGTTTCGTTTTGGCTGAGTCGGATTTAAAAATGCGTGGTTCTGGTGAAATCTTTG
GTACTCGTCAGTCTGGAATTCCAGAATTTCAAGTAGCTGATATCGTTGAGGATTATCCTATTTTAGAAGAAGCACGCAAA
GTTTCTGCAGCGATTGTTTCTGATCCTAACTGGATATATGAAAAACAGTGGCAGTTAGTAGCAAAAAATATTAGAAAAAA
AGAAGTTTATGATTAA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(254-411)

Helicase conserved C-terminal domain (Helicase_C)

(458-566)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-665)

RecG wedge domain (RecG_wedge)

(10-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

71.535

100

0.715
  recG/mmsA Streptococcus pneumoniae R36A

71.535

100

0.715
  recG Bacillus subtilis subsp. subtilis str. 168

49.104

99.851

0.49
  recG Neisseria meningitidis strain C311

38.257

100

0.386

Multiple sequence alignment