Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5Y90_RS10790 Genome accession   NZ_CP039143
Coordinates   2283459..2283842 (-) Length   127 a.a.
NCBI ID   WP_004784987.1    Uniprot ID   N9NVI8
Organism   Acinetobacter sp. 10FS3-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2278459..2288842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5Y90_RS10775 (E5Y90_10830) - 2280405..2282477 (-) 2073 WP_151204720.1 methyl-accepting chemotaxis protein -
  E5Y90_RS10780 (E5Y90_10835) - 2282524..2283060 (-) 537 WP_174660198.1 chemotaxis protein CheW -
  E5Y90_RS10785 (E5Y90_10840) - 2283066..2283434 (-) 369 WP_151204718.1 response regulator -
  E5Y90_RS10790 (E5Y90_10845) pilG 2283459..2283842 (-) 384 WP_004784987.1 twitching motility response regulator PilG Regulator
  E5Y90_RS10795 (E5Y90_10850) - 2284128..2284775 (+) 648 WP_151205790.1 hypothetical protein -
  E5Y90_RS10800 (E5Y90_10855) - 2284827..2285951 (+) 1125 WP_174660199.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14287.34 Da        Isoelectric Point: 4.7172

>NTDB_id=357213 E5Y90_RS10790 WP_004784987.1 2283459..2283842(-) (pilG) [Acinetobacter sp. 10FS3-1]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=357213 E5Y90_RS10790 WP_004784987.1 2283459..2283842(-) (pilG) [Acinetobacter sp. 10FS3-1]
ATGGATGATAAATTCCAGAATTTAAAAGTTATGGTCATTGATGACTCAAAAACAATTCGCCGTACCGCAGAAACTTTACT
GCAACGCGAAGGCTATGAAGTCGTCACTGCCGTTGATGGTTTTGAAGCATTGTCTAAAATTGCAGAAGCCAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCGCGTCTGGATGGCTATCAAACCTGTGCCTTGATCAAAAACTCACAGAACTATCAG
AATATTCCTGTGATTATGCTTTCGAGTAAAGACGGTTTATTTGATCAGGCCAAAGGTCGTGTTGTCGGTTCGGATGAATA
TTTAACTAAACCTTTCAGTAAAGATGAATTGCTTAACGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9NVI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment