Detailed information NTG0356831

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: E5093_RS04635
• Genome accession: NZ_CP039031
• Coordinates: 991113..993515 (+)
• Length: 800 a.a.
• NCBI ID: WP_177156192.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain yy_1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	985404..998195	991113..993515	within	0

Gene organization within MGE regions

Location: 985404..998195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5093_RS04600	-	985404..985544 (-)	141	WP_005176552.1	hypothetical protein	-
E5093_RS04605 (E5093_04635)	-	985943..986875 (-)	933	WP_075168247.1	hypothetical protein	-
E5093_RS04610 (E5093_04640)	-	987140..987607 (+)	468	WP_005176559.1	YaiI/YqxD family protein	-
E5093_RS04615 (E5093_04645)	-	987613..988536 (+)	924	WP_177155448.1	DMT family transporter	-
E5093_RS04620 (E5093_04650)	-	988524..989090 (-)	567	WP_005176561.1	PilZ domain-containing protein	-
E5093_RS04625 (E5093_04655)	-	989116..990351 (+)	1236	WP_005176562.1	lipoprotein-releasing ABC transporter permease subunit	-
E5093_RS04630 (E5093_04660)	lolD	990344..991027 (+)	684	WP_005176563.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
E5093_RS04635 (E5093_04665)	comA/comEC	991113..993515 (+)	2403	WP_177156192.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
E5093_RS04640 (E5093_04670)	-	993512..994456 (-)	945	WP_177155449.1	lysophospholipid acyltransferase family protein	-
E5093_RS04645 (E5093_04675)	sppA	994587..995612 (+)	1026	WP_177155450.1	signal peptide peptidase SppA	-
E5093_RS04650 (E5093_04680)	-	995609..996412 (+)	804	WP_177155451.1	alpha/beta fold hydrolase	-
E5093_RS04655 (E5093_04685)	purN	996489..997118 (-)	630	WP_016660003.1	phosphoribosylglycinamide formyltransferase	-
E5093_RS04660 (E5093_04690)	purM	997125..998195 (-)	1071	WP_005176576.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 91534.63 Da
• Isoelectric Point: 7.5248

>NTDB_id=356831 E5093_RS04635 WP_177156192.1 991113..993515(+) (comA/comEC) [Acinetobacter indicus strain yy_1]
MFKIMGAGWILGIACMGKMLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFLLGLNFAQNQLQER
LIFRELTRQPAEVVVYVQQINQLGSSQLRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLPAHSFAVPGAFDI
EQWYLQQNIMSGFQVQSIVELTESELYRLGFGAHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHPGLILALLTGDKS
LLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYARLPRSYLLLLPFMGCVFVYCAYVGFEIPAL
RTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSAAFWLSYGACFVLLRIYQTLRQQPVHPQQTLMQKLWQG
FRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVIVPLDILAGLSFYLAEPLSQLLFQLNDLALSLLLGC
LQLLDLLFAPQLIPVALSPPMLLSLVLGLIILFLPAGLVPKAWSALCLLPLLFQDQFSRQVELTVLDVGQGQAIFLRYRE
HSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQIYANAQLEVHPDSRFDYC
RQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQDYPDLKVDVLVLG
HHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVQARLNALKIPLWQTAQQGSIQFYPTENEVLPYRHTRVWLQRD

Nucleotide

• Length: 2403 bp

>NTDB_id=356831 E5093_RS04635 WP_177156192.1 991113..993515(+) (comA/comEC) [Acinetobacter indicus strain yy_1]
ATGTTCAAAATCATGGGCGCCGGCTGGATTTTAGGTATTGCCTGTATGGGCAAAATGCTATGGCCGATGCTGGATTTCCC
GCTCTGGTTGTCAGGCCTGCTACTGATTATCCTGCTTTTACAGCAAATAGCTGCTTTACATTGGTCCCATCTGGGCATCC
AATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTGTTGGGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGG
TTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGTCTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCA
GCTCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGGTGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAAC
TACAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCGGCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATATA
GAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGTCCAGTCGATTGTGGAACTGACTGAATCGGAACTGTA
TCGGCTGGGATTTGGGGCACATTTAAGACAGCATCAGCAACTCTGGCCGCAATTTAAATTGTGGATCGAAACACAGCGTT
TACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCCGGCTTAATACTGGCACTGCTGACTGGCGATAAAAGT
TTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGATGAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCT
GATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCACTCGCTATTGGCCCGAATTATATGCGCGATTGCCTC
GAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTATATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTC
AGAACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCTAAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGG
TAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGTCGGCGGCATTCTGGCTGTCTTATGGCGCCTGCTTTG
TGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCATCCGCAGCAGACGTTGATGCAGAAATTGTGGCAGGGC
TTCCGGCTGTTATTTGAATCGCAATGGAAAATTTTTATTGCGCTGTTTCCGCTAATGATTATTTTCTTCAAGCAGATTGC
CTGGATTGCACCGCTGAGTAATCTATTGGCCATTCCCTGGATCGGTCTGGTGATTGTGCCGCTGGATATTCTGGCCGGTT
TAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAGCTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGT
TTGCAGTTGCTGGATCTGCTGTTTGCACCACAACTGATTCCGGTTGCGCTGAGTCCACCGATGCTGCTGAGTCTGGTGCT
GGGACTGATCATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAGCCTGGTCAGCGCTGTGTTTATTGCCTTTGCTGTTTC
AGGACCAGTTTTCTCGGCAGGTGGAACTTACTGTGCTGGATGTTGGGCAGGGGCAGGCAATCTTTTTACGCTATCGTGAA
CACAGCATGATGATTGATATGGGCGGTCATTATGATGAACAGAAATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTT
AAGTGTCAAAGGCGTGCAGCAGTTAGATTATCTATGGCTGACCCATCTGGATCAGGATCATAGCGGCGCTTATCAGACTT
TAAAGCCACAGTTACAGGTGCAGCAGATCTATGCCAATGCACAGCTTGAGGTGCATCCTGACAGTCGCTTTGACTATTGC
CGGCAGGGACAGCAATGGCAGTGGCAGCCGGGCATCCAGATTCAGGTACTCTCTCCGAAACCGGAACAGTTAAATCCTGT
AGAACAGCAGAAAAATGAAAGTTCCTGTGTGCTGCTGGTTGAGTTTGCACAGGCTCAGCCTTATTCACGCTTTTTATTGA
TGGGCGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGATTATCCGGATTTAAAAGTGGATGTGCTGGTGCTCGGC
CATCATGGTAGCCGGCACAGTTCATCTTACCAATTTTTAAAACAGCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCT
GAATAACCGTTATGGGCATCCGAGCACGCAGGTACAAGCCCGACTGAACGCCTTAAAAATTCCATTATGGCAGACCGCGC
AGCAGGGTAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTACCGTACCGGCATACGCGGGTTTGGCTGCAGCGCGAT
TAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (547-657)

• Domain of unknown function (DUF4131) (DUF4131) (25-179)

• Competence protein (Competence) (234-515)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	48.162	100	0.491
comA/comEC	Acinetobacter baylyi ADP1	48.089	100	0.488
comA/comEC	Acinetobacter baumannii strain A118	47.672	100	0.486