Detailed information NTG0356776

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: E5A72_RS05050
• Genome accession: NZ_CP039025
• Coordinates: 1031812..1032294 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii ATCC 17978 substr. PMR-High
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1026812..1037294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5A72_RS05015 (E5A72_05015)	-	1026920..1027954 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
E5A72_RS05020 (E5A72_05020)	-	1028069..1029010 (+)	942	WP_085943440.1	lipase family alpha/beta hydrolase	-
E5A72_RS05025 (E5A72_05025)	rplS	1029062..1029430 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
E5A72_RS05030 (E5A72_05030)	trmD	1029638..1030378 (-)	741	WP_000464596.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
E5A72_RS05035 (E5A72_05035)	rimM	1030424..1030972 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
E5A72_RS05040 (E5A72_05040)	rpsP	1030992..1031243 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
E5A72_RS05045 (E5A72_05045)	pilE	1031390..1031815 (-)	426	WP_000788346.1	type IV pilin protein	Machinery gene
E5A72_RS05050 (E5A72_05050)	pilY2	1031812..1032294 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
E5A72_RS05055 (E5A72_05055)	pilY1	1032307..1036161 (-)	3855	WP_000768958.1	PilC/PilY family type IV pilus protein	Machinery gene
E5A72_RS05060 (E5A72_05060)	pilX	1036173..1036991 (-)	819	WP_000149378.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=356776 E5A72_RS05050 WP_001046417.1 1031812..1032294(-) (pilY2) [Acinetobacter baumannii ATCC 17978 substr. PMR-High]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=356776 E5A72_RS05050 WP_001046417.1 1031812..1032294(-) (pilY2) [Acinetobacter baumannii ATCC 17978 substr. PMR-High]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444