Detailed information NTG0356747

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RI02_RS16465
• Genome accession: NZ_CP039020
• Coordinates: 3185866..3187041 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain BA06
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3180866..3192041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI02_RS16435 (RI02_16525)	-	3181042..3181461 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
RI02_RS16440 (RI02_16530)	comFC	3181518..3182204 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
RI02_RS16445 (RI02_16535)	-	3182201..3182494 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
RI02_RS16450 (RI02_16540)	comFA	3182559..3183938 (-)	1380	WP_026050154.1	DEAD/DEAH box helicase	Machinery gene
RI02_RS16455 (RI02_16545)	-	3184058..3184900 (-)	843	WP_007499966.1	DegV family protein	-
RI02_RS16460 (RI02_16550)	degU	3185112..3185801 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
RI02_RS16465 (RI02_16555)	degS	3185866..3187041 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
RI02_RS16470 (RI02_16560)	-	3187263..3187931 (+)	669	WP_008348276.1	YigZ family protein	-
RI02_RS16475 (RI02_16565)	-	3187916..3189013 (+)	1098	WP_007499958.1	LCP family protein	-
RI02_RS16480 (RI02_16570)	-	3189051..3190118 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
RI02_RS16485 (RI02_16575)	tuaH	3190253..3191500 (-)	1248	WP_017368143.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=356747 RI02_RS16465 WP_003213166.1 3185866..3187041(-) (degS) [Bacillus altitudinis strain BA06]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=356747 RI02_RS16465 WP_003213166.1 3185866..3187041(-) (degS) [Bacillus altitudinis strain BA06]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTCAGGGAAAGAAGAGACGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841