Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   GQO96_RS01940 Genome accession   NZ_CP046898
Coordinates   414206..416251 (-) Length   681 a.a.
NCBI ID   WP_032030097.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain A1429     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 409206..421251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQO96_RS01905 (GQO96_01900) - 409690..410370 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  GQO96_RS01910 (GQO96_01905) - 410397..411038 (+) 642 WP_001093907.1 phospholipid-binding protein MlaC -
  GQO96_RS01915 (GQO96_01910) - 411050..411337 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  GQO96_RS01920 (GQO96_01915) - 411407..412420 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  GQO96_RS01925 (GQO96_01920) - 412578..413159 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  GQO96_RS01930 (GQO96_01925) - 413174..413575 (+) 402 WP_140955207.1 NUDIX hydrolase -
  GQO96_RS01935 (GQO96_01930) comF 413578..414213 (-) 636 WP_002125534.1 ComF family protein Machinery gene
  GQO96_RS01940 (GQO96_01935) recG 414206..416251 (-) 2046 WP_032030097.1 ATP-dependent DNA helicase RecG Machinery gene
  GQO96_RS01945 (GQO96_01940) - 416272..417087 (+) 816 WP_000547774.1 NAD-dependent epimerase/dehydratase family protein -
  GQO96_RS01950 (GQO96_01945) adeT2 417167..418153 (+) 987 WP_000712910.1 putative multidrug efflux protein AdeT2 -
  GQO96_RS01955 (GQO96_01950) plsB 418197..420770 (-) 2574 WP_032030098.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence


Protein


Download         Length: 681 a.a.        Molecular weight: 76464.09 Da        Isoelectric Point: 7.9257

>NTDB_id=356565 GQO96_RS01940 WP_032030097.1 414206..416251(-) (recG) [Acinetobacter baumannii strain A1429]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALYYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGYAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLQRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNNGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYIAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=356565 GQO96_RS01940 WP_032030097.1 414206..416251(-) (recG) [Acinetobacter baumannii strain A1429]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACACAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCTTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTATATTACATTCACGAGCCACCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAATGCGCAAAAACGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCGTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCTATGCTGAACTAATTGTGGGTACTCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCAACGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCCAATGCGTCAATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATAATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACATTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAACGCTGGCTTCCCGAAGCTCCTCGATACGCATATGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.776

98.238

0.489

  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405

  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405

  recG Bacillus subtilis subsp. subtilis str. 168

38.282

100

0.386


Multiple sequence alignment