Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   KAN01_RS17470 Genome accession   NZ_CP038816
Coordinates   3591366..3592496 (+) Length   376 a.a.
NCBI ID   WP_135925522.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN01     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3586366..3597496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN01_RS17445 (KAN01_17445) - 3586627..3586833 (-) 207 WP_002054207.1 DUF4199 domain-containing protein -
  KAN01_RS17450 (KAN01_17450) - 3586887..3589001 (-) 2115 WP_106479637.1 TonB-dependent copper receptor -
  KAN01_RS17455 (KAN01_17455) - 3589073..3589501 (-) 429 WP_002054220.1 DUF2946 family protein -
  KAN01_RS17460 (KAN01_17460) def 3589538..3590068 (-) 531 WP_002054252.1 peptide deformylase -
  KAN01_RS17465 (KAN01_17465) tsaP 3590191..3591345 (+) 1155 WP_135925520.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  KAN01_RS17470 (KAN01_17470) dprA 3591366..3592496 (+) 1131 WP_135925522.1 DNA-processing protein DprA Machinery gene
  KAN01_RS17475 (KAN01_17475) - 3592547..3593116 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  KAN01_RS17480 (KAN01_17480) - 3593509..3594429 (-) 921 WP_135925524.1 DMT family transporter -
  KAN01_RS17485 (KAN01_17485) - 3594535..3595188 (-) 654 WP_135925525.1 TetR/AcrR family transcriptional regulator -
  KAN01_RS17490 (KAN01_17490) - 3595322..3596536 (+) 1215 WP_004711040.1 MFS transporter -
  KAN01_RS17495 (KAN01_17495) - 3596558..3597322 (+) 765 WP_135925527.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41751.23 Da        Isoelectric Point: 6.5812

>NTDB_id=355758 KAN01_RS17470 WP_135925522.1 3591366..3592496(+) (dprA) [Acinetobacter nosocomialis strain KAN01]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYSGTCEKATQPDGLAKWSSLGLHANHLKRVNEFQTAQGQAQFEQLIQQV
QQHTDFILTPDDSGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQMAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQSQNEETNTNTPEIP
VHLIDLYQSLDWVGQNIDQLVIHHNVSVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=355758 KAN01_RS17470 WP_135925522.1 3591366..3592496(+) (dprA) [Acinetobacter nosocomialis strain KAN01]
ATGCTCACCCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTACAGCACTCATTAGTTAGTTTTAA
AAAAATTATCGATTATTCTGGAACTTGTGAAAAAGCAACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGGCACAAGGCCAAGCTCAGTTCGAACAGCTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACGCCCGATGACTCTGGCTACCCTACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAGGCATTATTGCAACCACAAATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGTCAGATGGCTTATGATTTTGCCTACTACTTAAGTGAAAAGGGCTTTTTTATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCCGCTCATCAACGTACAATTGCAGTCACGGGTACGGGCCTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTGGCAGAACATATTTTGGCTCAGAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGTGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGCAAAACCGTATTCGCTATTCCGGGTCATATTTA
TAGTGAGTTCCATCAAGGATGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTTGATCATCCCGAACAAATTATTGAAG
ACCTCGCCTTACCAACTCAGTGGCAAAGCCAGCAACAAAGTCAAAATGAAGAAACTAATACGAATACTCCAGAAATTCCT
GTGCATTTGATTGATCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTTTC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

95.479

100

0.955

  dprA Acinetobacter baumannii D1279779

95.479

100

0.955

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715


Multiple sequence alignment