Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KAN01_RS03245 Genome accession   NZ_CP038816
Coordinates   665337..665720 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 660337..670720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN01_RS03235 (KAN01_03235) - 663238..664356 (-) 1119 WP_032010078.1 efflux RND transporter periplasmic adaptor subunit -
  KAN01_RS03240 (KAN01_03240) - 664416..665054 (-) 639 WP_032010079.1 hypothetical protein -
  KAN01_RS03245 (KAN01_03245) pilG 665337..665720 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  KAN01_RS03250 (KAN01_03250) - 665747..666109 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  KAN01_RS03255 (KAN01_03255) - 666167..666703 (+) 537 WP_002051357.1 chemotaxis protein CheW -
  KAN01_RS03260 (KAN01_03260) - 666750..668831 (+) 2082 WP_135924553.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=355731 KAN01_RS03245 WP_000389061.1 665337..665720(+) (pilG) [Acinetobacter nosocomialis strain KAN01]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=355731 KAN01_RS03245 WP_000389061.1 665337..665720(+) (pilG) [Acinetobacter nosocomialis strain KAN01]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGTGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGTTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment