Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | KAN01_RS01655 | Genome accession | NZ_CP038816 |
| Coordinates | 348325..348798 (+) | Length | 157 a.a. |
| NCBI ID | WP_016803890.1 | Uniprot ID | A0A1V0YNQ0 |
| Organism | Acinetobacter nosocomialis strain KAN01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343325..353798
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN01_RS01630 (KAN01_01630) | - | 343788..345893 (-) | 2106 | WP_004711681.1 | RelA/SpoT family protein | - |
| KAN01_RS01635 (KAN01_01635) | - | 345933..346064 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| KAN01_RS01640 (KAN01_01640) | rpoZ | 346103..346381 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| KAN01_RS01645 (KAN01_01645) | gmk | 346454..347083 (-) | 630 | WP_016803891.1 | guanylate kinase | - |
| KAN01_RS01650 (KAN01_01650) | ispH | 347206..348156 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| KAN01_RS01655 (KAN01_01655) | fimU | 348325..348798 (+) | 474 | WP_016803890.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| KAN01_RS01660 (KAN01_01660) | pilV | 348792..349352 (+) | 561 | WP_079377028.1 | type IV pilus modification protein PilV | Machinery gene |
| KAN01_RS01665 (KAN01_01665) | pilW | 349352..350350 (+) | 999 | WP_032011724.1 | PilW family protein | Machinery gene |
| KAN01_RS01670 (KAN01_01670) | pilX | 350347..351162 (+) | 816 | WP_004711686.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16856.44 Da Isoelectric Point: 9.3359
>NTDB_id=355722 KAN01_RS01655 WP_016803890.1 348325..348798(+) (fimU) [Acinetobacter nosocomialis strain KAN01]
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=355722 KAN01_RS01655 WP_016803890.1 348325..348798(+) (fimU) [Acinetobacter nosocomialis strain KAN01]
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAACGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAACGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
85.987 |
100 |
0.86 |