Detailed information
Bioinformatically predicted
Overview
| Name | recG | Type | Machinery gene |
| Locus tag | GPY31_RS22750 | Genome accession | NZ_CP046760 |
| Coordinates | 2911802..2913883 (+) | Length | 693 a.a. |
| NCBI ID | WP_158111863.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain AM51552 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2906802..2918883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY31_RS22730 | gmk | 2907706..2908329 (+) | 624 | WP_005496750.1 | guanylate kinase | - |
| GPY31_RS22735 | rpoZ | 2908511..2908783 (+) | 273 | WP_005379346.1 | DNA-directed RNA polymerase subunit omega | - |
| GPY31_RS22740 | spoT | 2908823..2910943 (+) | 2121 | WP_005459012.1 | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | - |
| GPY31_RS22745 | trmH | 2911000..2911683 (+) | 684 | WP_005478720.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| GPY31_RS22750 | recG | 2911802..2913883 (+) | 2082 | WP_158111863.1 | ATP-dependent DNA helicase RecG | Machinery gene |
| GPY31_RS22755 | - | 2914116..2915507 (+) | 1392 | WP_042772208.1 | uracil-xanthine permease family protein | - |
| GPY31_RS22760 | envZ | 2915572..2916863 (-) | 1292 | Protein_2570 | two-component system sensor histidine kinase EnvZ | - |
| GPY31_RS22765 | ompR | 2916969..2917688 (-) | 720 | WP_005459027.1 | two-component system response regulator OmpR | - |
| GPY31_RS22770 | - | 2917907..2918299 (-) | 393 | WP_042772206.1 | DUF1090 domain-containing protein | - |
Sequence
Protein
Download Length: 693 a.a. Molecular weight: 76775.86 Da Isoelectric Point: 8.2191
>NTDB_id=355056 GPY31_RS22750 WP_158111863.1 2911802..2913883(+) (recG) [Vibrio parahaemolyticus strain AM51552]
MSAKMLSAVPLTSLSGVGAKVAEKLAKVGLHSVQDLLFHLPLRYEDRTRIYPIAKLHAGLWAAVQGKVMTVDTIFGKRKM
LTVKISDGNGTITLRFFNFTAAMKNNFSQGKLVHAYGEIKRGGMGLEIVHPDYKFYASEHKPDVEQSLTPVYPTTDGLRQ
ITLRNLTEQALVLLDKAAVQELLPSGLYNHQITMSQALHTIHRPPPTINLDEFDEGKHPAQIRLIMEELLAQNLSMLAVR
SKGQQDIALPLAPCDKLKKQLLAQLPFSPTNAQARVVKEIESDLEKPHPMMRLVQGDVGSGKTLVAALAAVRAIEHGYQV
ALMAPTELLAEQHAINFANWFETMGIQVGWLAGKLKGKAKETELARIASGEAQMIVGTHALFQEHVEFHHLALVIIDEQH
RFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDDIVERVRNACL
NEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQEFKDNKLHLLVATTVIEVGVDVP
NSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQ
TGLADFKIADLVRDQRLIPEVQRIARHIHDNYPSNAAAIIDRWLGERDIYSKA
MSAKMLSAVPLTSLSGVGAKVAEKLAKVGLHSVQDLLFHLPLRYEDRTRIYPIAKLHAGLWAAVQGKVMTVDTIFGKRKM
LTVKISDGNGTITLRFFNFTAAMKNNFSQGKLVHAYGEIKRGGMGLEIVHPDYKFYASEHKPDVEQSLTPVYPTTDGLRQ
ITLRNLTEQALVLLDKAAVQELLPSGLYNHQITMSQALHTIHRPPPTINLDEFDEGKHPAQIRLIMEELLAQNLSMLAVR
SKGQQDIALPLAPCDKLKKQLLAQLPFSPTNAQARVVKEIESDLEKPHPMMRLVQGDVGSGKTLVAALAAVRAIEHGYQV
ALMAPTELLAEQHAINFANWFETMGIQVGWLAGKLKGKAKETELARIASGEAQMIVGTHALFQEHVEFHHLALVIIDEQH
RFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDDIVERVRNACL
NEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQEFKDNKLHLLVATTVIEVGVDVP
NSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQ
TGLADFKIADLVRDQRLIPEVQRIARHIHDNYPSNAAAIIDRWLGERDIYSKA
Nucleotide
Download Length: 2082 bp
>NTDB_id=355056 GPY31_RS22750 WP_158111863.1 2911802..2913883(+) (recG) [Vibrio parahaemolyticus strain AM51552]
ATGTCTGCCAAAATGCTATCTGCTGTTCCTTTAACTTCTCTATCAGGAGTTGGCGCCAAAGTCGCAGAAAAACTCGCTAA
AGTCGGCTTGCATAGCGTTCAAGATTTGTTGTTCCACCTGCCTCTACGCTACGAAGATCGCACCCGCATTTATCCTATTG
CCAAACTGCACGCAGGCCTTTGGGCCGCGGTACAAGGTAAAGTCATGACCGTCGATACCATTTTTGGTAAACGCAAAATG
CTGACAGTCAAAATCAGTGACGGCAATGGCACCATCACGCTGCGTTTTTTCAACTTTACTGCAGCGATGAAGAACAATTT
TTCACAGGGTAAGTTAGTACACGCTTACGGAGAAATTAAGCGTGGTGGTATGGGGCTGGAAATTGTGCACCCTGACTACA
AATTTTACGCCAGTGAACACAAGCCAGATGTGGAACAAAGCTTAACCCCGGTTTATCCAACCACAGATGGCCTGCGTCAA
ATCACTTTGCGTAACCTTACTGAGCAAGCATTGGTGCTACTCGATAAAGCGGCAGTGCAAGAATTGCTACCTTCTGGCTT
GTATAACCATCAGATTACTATGTCGCAGGCGTTGCACACCATTCATCGCCCGCCGCCAACCATTAATTTAGATGAATTTG
ATGAAGGTAAGCACCCCGCTCAAATCCGTTTGATCATGGAAGAGTTGCTCGCTCAAAACTTATCGATGTTGGCGGTTCGC
AGCAAAGGCCAGCAAGATATCGCCTTACCGCTCGCACCATGTGACAAACTGAAAAAACAGCTGTTGGCGCAACTGCCGTT
TTCTCCGACCAATGCTCAAGCACGCGTGGTGAAAGAGATTGAATCCGACCTCGAAAAGCCGCACCCAATGATGCGTCTTG
TCCAAGGTGACGTAGGCTCAGGAAAAACCCTCGTCGCGGCACTGGCTGCGGTTCGAGCTATCGAGCACGGTTATCAGGTC
GCACTAATGGCACCAACTGAGCTGCTCGCCGAACAACACGCCATCAATTTCGCCAACTGGTTTGAAACCATGGGCATTCA
AGTGGGCTGGCTTGCTGGTAAGCTCAAGGGCAAAGCCAAAGAGACGGAACTGGCTCGCATTGCCAGCGGTGAAGCGCAAA
TGATAGTGGGTACTCACGCCCTCTTCCAAGAACATGTGGAATTTCATCACCTAGCTTTAGTCATCATTGATGAGCAGCAC
CGCTTTGGCGTCCATCAGCGATTAGAGTTACGTGAGAAAGGGGCAAAACAAGGCGCGTATCCGCATCAGCTCATCATGAC
GGCGACTCCGATTCCTCGCACGCTAGCAATGACAGCGTATGCTGATTTGGAAACGTCGGTGATAGACGAATTACCACCAG
GCCGAACGCCGATTCAAACCGTCGCCATTCCAGATACCAAACGGGACGACATTGTCGAGCGGGTACGAAACGCTTGTCTT
AACGAAGGCAAGCAAGCGTATTGGGTGTGTACGCTGATCGATGAATCGGAAGTGTTGGAAGCTCAAGCCGCAGCAGACAC
CGCCGAAGAGTTGCAGCGCAAACTGCCAGATGTAAAGATTGGCCTAGTTCATGGCCGTATGAAGCCCGCCGAAAAGCAAG
CTGTCATGCAAGAGTTTAAAGACAACAAGCTCCACCTGCTCGTAGCCACGACGGTGATAGAAGTTGGCGTAGACGTGCCA
AACTCTAGCTTGATGATCATAGAAAACCCTGAACGCCTTGGTTTGGCGCAATTACACCAGTTAAGAGGCCGCGTCGGTCG
AGGCTCTGTTGCCAGTCACTGTGTCCTGTTGTACCACTCCCCCCTGTCGAAAACCGCGCAAAAACGCCTCGGTGTGCTGC
GTGAAAGTAACGATGGCTTTGTTATTGCACAGAAAGACCTCGAGATCCGCGGGCCCGGCGAATTGTTGGGCACCAAACAA
ACAGGCTTGGCTGATTTCAAAATTGCCGATTTAGTTCGAGATCAACGCTTAATTCCCGAAGTTCAACGTATTGCACGTCA
TATTCACGACAATTACCCAAGCAATGCAGCCGCCATCATCGATCGCTGGCTAGGCGAGCGTGATATCTACTCCAAAGCGT
AA
ATGTCTGCCAAAATGCTATCTGCTGTTCCTTTAACTTCTCTATCAGGAGTTGGCGCCAAAGTCGCAGAAAAACTCGCTAA
AGTCGGCTTGCATAGCGTTCAAGATTTGTTGTTCCACCTGCCTCTACGCTACGAAGATCGCACCCGCATTTATCCTATTG
CCAAACTGCACGCAGGCCTTTGGGCCGCGGTACAAGGTAAAGTCATGACCGTCGATACCATTTTTGGTAAACGCAAAATG
CTGACAGTCAAAATCAGTGACGGCAATGGCACCATCACGCTGCGTTTTTTCAACTTTACTGCAGCGATGAAGAACAATTT
TTCACAGGGTAAGTTAGTACACGCTTACGGAGAAATTAAGCGTGGTGGTATGGGGCTGGAAATTGTGCACCCTGACTACA
AATTTTACGCCAGTGAACACAAGCCAGATGTGGAACAAAGCTTAACCCCGGTTTATCCAACCACAGATGGCCTGCGTCAA
ATCACTTTGCGTAACCTTACTGAGCAAGCATTGGTGCTACTCGATAAAGCGGCAGTGCAAGAATTGCTACCTTCTGGCTT
GTATAACCATCAGATTACTATGTCGCAGGCGTTGCACACCATTCATCGCCCGCCGCCAACCATTAATTTAGATGAATTTG
ATGAAGGTAAGCACCCCGCTCAAATCCGTTTGATCATGGAAGAGTTGCTCGCTCAAAACTTATCGATGTTGGCGGTTCGC
AGCAAAGGCCAGCAAGATATCGCCTTACCGCTCGCACCATGTGACAAACTGAAAAAACAGCTGTTGGCGCAACTGCCGTT
TTCTCCGACCAATGCTCAAGCACGCGTGGTGAAAGAGATTGAATCCGACCTCGAAAAGCCGCACCCAATGATGCGTCTTG
TCCAAGGTGACGTAGGCTCAGGAAAAACCCTCGTCGCGGCACTGGCTGCGGTTCGAGCTATCGAGCACGGTTATCAGGTC
GCACTAATGGCACCAACTGAGCTGCTCGCCGAACAACACGCCATCAATTTCGCCAACTGGTTTGAAACCATGGGCATTCA
AGTGGGCTGGCTTGCTGGTAAGCTCAAGGGCAAAGCCAAAGAGACGGAACTGGCTCGCATTGCCAGCGGTGAAGCGCAAA
TGATAGTGGGTACTCACGCCCTCTTCCAAGAACATGTGGAATTTCATCACCTAGCTTTAGTCATCATTGATGAGCAGCAC
CGCTTTGGCGTCCATCAGCGATTAGAGTTACGTGAGAAAGGGGCAAAACAAGGCGCGTATCCGCATCAGCTCATCATGAC
GGCGACTCCGATTCCTCGCACGCTAGCAATGACAGCGTATGCTGATTTGGAAACGTCGGTGATAGACGAATTACCACCAG
GCCGAACGCCGATTCAAACCGTCGCCATTCCAGATACCAAACGGGACGACATTGTCGAGCGGGTACGAAACGCTTGTCTT
AACGAAGGCAAGCAAGCGTATTGGGTGTGTACGCTGATCGATGAATCGGAAGTGTTGGAAGCTCAAGCCGCAGCAGACAC
CGCCGAAGAGTTGCAGCGCAAACTGCCAGATGTAAAGATTGGCCTAGTTCATGGCCGTATGAAGCCCGCCGAAAAGCAAG
CTGTCATGCAAGAGTTTAAAGACAACAAGCTCCACCTGCTCGTAGCCACGACGGTGATAGAAGTTGGCGTAGACGTGCCA
AACTCTAGCTTGATGATCATAGAAAACCCTGAACGCCTTGGTTTGGCGCAATTACACCAGTTAAGAGGCCGCGTCGGTCG
AGGCTCTGTTGCCAGTCACTGTGTCCTGTTGTACCACTCCCCCCTGTCGAAAACCGCGCAAAAACGCCTCGGTGTGCTGC
GTGAAAGTAACGATGGCTTTGTTATTGCACAGAAAGACCTCGAGATCCGCGGGCCCGGCGAATTGTTGGGCACCAAACAA
ACAGGCTTGGCTGATTTCAAAATTGCCGATTTAGTTCGAGATCAACGCTTAATTCCCGAAGTTCAACGTATTGCACGTCA
TATTCACGACAATTACCCAAGCAATGCAGCCGCCATCATCGATCGCTGGCTAGGCGAGCGTGATATCTACTCCAAAGCGT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recG | Neisseria meningitidis strain C311 |
49.256 |
96.97 |
0.478 |
| recG/mmsA | Streptococcus pneumoniae R6 |
40.299 |
96.681 |
0.39 |
| recG/mmsA | Streptococcus pneumoniae R36A |
40.299 |
96.681 |
0.39 |
| recG | Bacillus subtilis subsp. subtilis str. 168 |
39.726 |
94.805 |
0.377 |