Detailed information NTG0355024

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: EQK04_RS16465
• Genome accession: NZ_CP038517
• Coordinates: 3185849..3187024 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCU11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3180849..3192024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQK04_RS16435 (EQK04_16525)	-	3181025..3181444 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
EQK04_RS16440 (EQK04_16530)	comFC	3181501..3182187 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
EQK04_RS16445 (EQK04_16535)	-	3182184..3182477 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
EQK04_RS16450 (EQK04_16540)	comFA	3182542..3183921 (-)	1380	WP_026050154.1	DEAD/DEAH box helicase	Machinery gene
EQK04_RS16455 (EQK04_16545)	-	3184041..3184883 (-)	843	WP_007499966.1	DegV family protein	-
EQK04_RS16460 (EQK04_16550)	degU	3185095..3185784 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
EQK04_RS16465 (EQK04_16555)	degS	3185849..3187024 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
EQK04_RS16470 (EQK04_16560)	-	3187246..3187914 (+)	669	WP_008348276.1	YigZ family protein	-
EQK04_RS16475 (EQK04_16565)	-	3187899..3188996 (+)	1098	WP_007499958.1	LCP family protein	-
EQK04_RS16480 (EQK04_16570)	-	3189034..3190101 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
EQK04_RS16485 (EQK04_16575)	tuaH	3190236..3191483 (-)	1248	WP_017368143.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=355024 EQK04_RS16465 WP_003213166.1 3185849..3187024(-) (degS) [Bacillus altitudinis strain SCU11]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=355024 EQK04_RS16465 WP_003213166.1 3185849..3187024(-) (degS) [Bacillus altitudinis strain SCU11]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTCAGGGAAAGAAGAGACGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841