Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   GPA00_RS07605 Genome accession   NZ_CP046629
Coordinates   1531364..1532026 (-) Length   220 a.a.
NCBI ID   WP_157328178.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU G6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1526364..1537026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA00_RS07585 (GPA00_07585) - 1527046..1527759 (+) 714 WP_157328172.1 ABC transporter transmembrane domain-containing protein -
  GPA00_RS07590 (GPA00_07590) - 1527899..1528669 (+) 771 WP_232524193.1 ATP-binding cassette domain-containing protein -
  GPA00_RS07595 (GPA00_07595) xerS 1529189..1530259 (+) 1071 WP_157328174.1 tyrosine recombinase XerS Machinery gene
  GPA00_RS07600 (GPA00_07600) - 1530423..1531367 (-) 945 WP_157328176.1 sensor histidine kinase -
  GPA00_RS07605 (GPA00_07605) braR 1531364..1532026 (-) 663 WP_157328178.1 response regulator transcription factor Regulator
  GPA00_RS07610 (GPA00_07610) - 1532126..1534111 (-) 1986 WP_157328180.1 FtsX-like permease family protein -
  GPA00_RS07615 (GPA00_07615) - 1534113..1534865 (-) 753 WP_033152622.1 ABC transporter ATP-binding protein -
  GPA00_RS07620 (GPA00_07620) - 1535302..1536123 (-) 822 WP_157328182.1 TIM barrel protein -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 25490.28 Da        Isoelectric Point: 4.9605

>NTDB_id=354130 GPA00_RS07605 WP_157328178.1 1531364..1532026(-) (braR) [Streptococcus equinus strain CNU G6]
MKQGKIYIVEDNQTIVTLLKQHLAKSYDVFSVNNFRAIKQEIEEIKPDLILMDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFISKPFSLTILDAKISAFLRRAYQFTSDNYQLDEFSLSRDGILSNGSEQINLSPTENKILSI
LFERQNQVVPKEELLEKLWENESFIDQNTLSVNMTRLRKKVQPIGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=354130 GPA00_RS07605 WP_157328178.1 1531364..1532026(-) (braR) [Streptococcus equinus strain CNU G6]
ATGAAACAAGGAAAAATTTATATTGTCGAAGACAATCAAACCATTGTAACTTTGCTAAAGCAGCACTTGGCTAAATCCTA
TGACGTTTTTAGTGTCAACAATTTTCGTGCTATTAAGCAAGAGATCGAAGAAATAAAACCAGATCTTATTTTGATGGATA
TTACACTGCCTTACTTTAATGGCTTTTACTGGACGACCGAAATCCGTAAAACCATGACTTTACCTATTATTTTTATCTCT
TCAAGCGATGATGAAATGGATACTGTCATGGCACTTAACATGGGAGGAGATGACTTTATCTCTAAACCATTCTCTCTAAC
TATTTTGGATGCCAAGATTTCAGCATTTTTGCGTAGAGCATACCAGTTCACTTCTGATAACTATCAACTTGATGAGTTTT
CACTGTCACGTGATGGTATTTTGTCAAATGGGAGCGAGCAAATTAATCTTTCTCCAACAGAAAATAAAATCCTAAGTATC
TTGTTTGAACGTCAAAATCAAGTCGTCCCAAAAGAAGAATTGCTAGAAAAACTGTGGGAGAACGAAAGTTTTATCGACCA
AAATACTTTGAGTGTGAATATGACACGTCTACGTAAAAAAGTACAGCCTATTGGCTTTGATCGCATCCATACCGTGAGAG
GAGTAGGGTACCTTCTAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

99.091

0.482

  vicR Streptococcus mutans UA159

34.632

100

0.364


Multiple sequence alignment