Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   GO596_RS06995 Genome accession   NZ_CP046628
Coordinates   1404767..1405207 (+) Length   146 a.a.
NCBI ID   WP_021142471.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399767..1410207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS06960 (GO596_06960) queD 1399777..1400223 (+) 447 WP_027968631.1 6-carboxytetrahydropterin synthase QueD -
  GO596_RS06965 (GO596_06965) queE 1400216..1400929 (+) 714 WP_157339455.1 7-carboxy-7-deazaguanine synthase QueE -
  GO596_RS06970 (GO596_06970) queF 1400944..1401435 (+) 492 WP_021142478.1 preQ(1) synthase -
  GO596_RS06975 (GO596_06975) - 1401474..1401971 (-) 498 WP_157339456.1 DUF308 domain-containing protein -
  GO596_RS06980 (GO596_06980) gdhA 1402201..1403550 (+) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  GO596_RS06985 (GO596_06985) - 1403703..1404206 (+) 504 WP_157339457.1 GNAT family N-acetyltransferase -
  GO596_RS06990 (GO596_06990) - 1404209..1404619 (+) 411 WP_157339458.1 peptide deformylase -
  GO596_RS06995 (GO596_06995) rcrR 1404767..1405207 (+) 441 WP_021142471.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  GO596_RS07000 (GO596_07000) rcrP 1405211..1407025 (+) 1815 WP_157339459.1 ABC transporter ATP-binding protein Regulator
  GO596_RS07005 (GO596_07005) rcrQ 1407015..1408787 (+) 1773 WP_157339460.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17068.56 Da        Isoelectric Point: 7.4039

>NTDB_id=354012 GO596_RS06995 WP_021142471.1 1404767..1405207(+) (rcrR) [Streptococcus equinus strain CNU 77-23]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVELTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=354012 GO596_RS06995 WP_021142471.1 1404767..1405207(+) (rcrR) [Streptococcus equinus strain CNU 77-23]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGAGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCCTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

51.748

97.945

0.507