Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GO596_RS07000 Genome accession   NZ_CP046628
Coordinates   1405211..1407025 (+) Length   604 a.a.
NCBI ID   WP_157339459.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400211..1412025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS06965 (GO596_06965) queE 1400216..1400929 (+) 714 WP_157339455.1 7-carboxy-7-deazaguanine synthase QueE -
  GO596_RS06970 (GO596_06970) queF 1400944..1401435 (+) 492 WP_021142478.1 preQ(1) synthase -
  GO596_RS06975 (GO596_06975) - 1401474..1401971 (-) 498 WP_157339456.1 DUF308 domain-containing protein -
  GO596_RS06980 (GO596_06980) gdhA 1402201..1403550 (+) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  GO596_RS06985 (GO596_06985) - 1403703..1404206 (+) 504 WP_157339457.1 GNAT family N-acetyltransferase -
  GO596_RS06990 (GO596_06990) - 1404209..1404619 (+) 411 WP_157339458.1 peptide deformylase -
  GO596_RS06995 (GO596_06995) rcrR 1404767..1405207 (+) 441 WP_021142471.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  GO596_RS07000 (GO596_07000) rcrP 1405211..1407025 (+) 1815 WP_157339459.1 ABC transporter ATP-binding protein Regulator
  GO596_RS07005 (GO596_07005) rcrQ 1407015..1408787 (+) 1773 WP_157339460.1 ABC transporter ATP-binding protein Regulator
  GO596_RS09455 - 1408894..1410765 (+) 1872 WP_198362589.1 hypothetical protein -
  GO596_RS07015 (GO596_07015) - 1410768..1411238 (+) 471 WP_157339461.1 pyridoxamine 5'-phosphate oxidase family protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67007.80 Da        Isoelectric Point: 6.0521

>NTDB_id=354013 GO596_RS07000 WP_157339459.1 1405211..1407025(+) (rcrP) [Streptococcus equinus strain CNU 77-23]
MLKIFKRLTAKEVAMIIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNFDAPGMRMILLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDYSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVVTKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMIFMLAFLLMMVMPKQRMIQKLTDKLNSITRESLSGIRVVRAYNAESYQDGKFEKANNDVTNLNLFIG
RSMSLMSPVMTSISSGMTLAIYWIGAFLIEDIAIPKDPTKIAGAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIAVFFILP
RAVVAAGRINEVLDTKSSVLYPEESKAEPKEKGTVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGVNVRDYDHDTLHKIVGYIPQKAVLFSGDITSNMDMGDSNSSPLDDDKIWEALDLAQGRDFVES
KEGQLKAPVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=354013 GO596_RS07000 WP_157339459.1 1405211..1407025(+) (rcrP) [Streptococcus equinus strain CNU 77-23]
ATGTTAAAGATTTTTAAACGATTAACGGCAAAAGAAGTCGCTATGATAATTATTGCCGTACTATTTGTGTGTTTGAATGT
TTTCTTGGATTTAAAAATCCCTGATTACATGTCAGATATCACATCCTTGCTATCAACTCAAGGAACAAAAGCGAAAGATA
TATTTGCTTGGAATTTTGATGCCCCTGGAATGCGTATGATCTTGCTTTCTTTAGGAAGTTTTGCAGCATCTGTGGTTGTC
GGTTTCTTAGCGGCACGTATCGCAGCAAGTTTCAGTACACGTCTGCGTGATGATATTTTCCATAGTGTTTTAGACTATTC
GGATGCCGAAATCAAGAAGTTTTCAATTCCAAGTCTTTTAACACGTACAACGAATGATATTACTCAAATTCAATTAGTCT
TCACAATGGGACTTCAAGTTGTTACTAAAGGTCCGATTATGGCGATTTGGGCAATTACTAAGATTGCTGATAAAAACCAT
GAATGGTTAATGGTACTTGTTGTGGCGGTTGCAGTCATGATTTTCATGCTTGCTTTCCTTCTTATGATGGTAATGCCAAA
ACAACGTATGATTCAAAAACTTACTGATAAACTAAACAGTATTACACGTGAATCATTAAGTGGTATTCGTGTTGTTCGAG
CTTACAACGCTGAAAGCTACCAAGATGGTAAATTTGAAAAGGCAAATAACGATGTCACAAATCTTAACCTTTTCATTGGA
CGTTCAATGTCATTGATGTCACCGGTGATGACAAGTATTTCAAGTGGTATGACATTGGCGATTTACTGGATTGGTGCCTT
CTTGATTGAAGATATTGCTATTCCAAAAGATCCGACAAAAATTGCAGGCGCTATGCAAGACAAGGTGAACATTTTCTCTG
ATATGGTGGTTTATTCATCATATGCCATGCAAGTTGTTATCGGATTTATGATGATGATTGCTGTGTTCTTCATCTTGCCG
CGTGCGGTTGTAGCGGCAGGTCGTATCAATGAAGTTTTGGATACAAAATCATCTGTACTTTATCCTGAAGAAAGTAAAGC
TGAACCAAAAGAAAAAGGAACTGTAGAATTTGACAATGTTTCATTCCGATACAGTAAAAATTCTGAGGCTGTCCTAGAAC
ATGTTTCTTTCAAAGCAAAAGCTGGTGATACTGTTGCCTTTATTGGGTCAACTGGTTCAGGTAAATCAACCTTAGTGAAC
TTGATTCCACGTTTCTACGATGCGACGGAAGGAACAATCAAGGTTGATGGTGTTAATGTTCGTGATTACGACCATGATAC
GCTTCATAAGATTGTCGGATACATTCCACAAAAAGCAGTTCTCTTTAGCGGAGATATCACTTCTAATATGGATATGGGTG
ACAGCAATAGTTCACCACTTGATGATGATAAAATCTGGGAAGCTCTTGACTTGGCTCAAGGTAGAGACTTTGTCGAAAGC
AAAGAAGGTCAGCTAAAAGCACCAGTTTCTCAAGGCGGACAAAATTTCTCAGGTGGTCAAAAGCAACGTTTGGCAATTGC
GCGTGCTCTTGCACGTAAACCAGAAATCATTATCTTTGATGATTCATTCTCTGCGCTTGACTACAAGACTGACCGAATTC
TTCGTTCACAATTGAAAGAACGCACAGCTGACATGACAAAATTGATTGTTGCTCAACGTATTTCGACAATCATGGACGCT
GACCAAATCTTGGTTCTTGACGAAGGTAAAGTTGTTGGTCAAGGTACTCACGAAGAACTTCTTGCAAATAACGAAGTTTA
CCGTGAAATTGCCTACTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-270)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.099

100

0.682