Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GO596_RS07005 Genome accession   NZ_CP046628
Coordinates   1407015..1408787 (+) Length   590 a.a.
NCBI ID   WP_157339460.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402015..1413787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS06980 (GO596_06980) gdhA 1402201..1403550 (+) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  GO596_RS06985 (GO596_06985) - 1403703..1404206 (+) 504 WP_157339457.1 GNAT family N-acetyltransferase -
  GO596_RS06990 (GO596_06990) - 1404209..1404619 (+) 411 WP_157339458.1 peptide deformylase -
  GO596_RS06995 (GO596_06995) rcrR 1404767..1405207 (+) 441 WP_021142471.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  GO596_RS07000 (GO596_07000) rcrP 1405211..1407025 (+) 1815 WP_157339459.1 ABC transporter ATP-binding protein Regulator
  GO596_RS07005 (GO596_07005) rcrQ 1407015..1408787 (+) 1773 WP_157339460.1 ABC transporter ATP-binding protein Regulator
  GO596_RS09455 - 1408894..1410765 (+) 1872 WP_198362589.1 hypothetical protein -
  GO596_RS07015 (GO596_07015) - 1410768..1411238 (+) 471 WP_157339461.1 pyridoxamine 5'-phosphate oxidase family protein -
  GO596_RS07020 (GO596_07020) - 1411293..1412141 (-) 849 WP_198362590.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65328.31 Da        Isoelectric Point: 4.9717

>NTDB_id=354014 GO596_RS07005 WP_157339460.1 1407015..1408787(+) (rcrQ) [Streptococcus equinus strain CNU 77-23]
MENKKKASFYSRMKPYIKGFQFPFILAVIGAIISATITVIGPDKLKEITNTIMDGLTPTKMGTIPGVDLDKVGEIAMTLA
ILYGVSAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLAQSLNQSLGTLVTSVVL
LFGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDDSHKERQLTAVKGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQISIDGIDTRNMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQRAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=354014 GO596_RS07005 WP_157339460.1 1407015..1408787(+) (rcrQ) [Streptococcus equinus strain CNU 77-23]
ATGGAAAATAAGAAAAAAGCATCTTTCTATAGCAGAATGAAGCCATATATCAAAGGTTTCCAATTTCCATTCATCCTTGC
GGTGATTGGAGCGATTATTTCTGCGACTATCACGGTTATTGGACCTGATAAATTAAAAGAGATTACAAATACGATTATGG
ACGGATTGACACCTACGAAAATGGGAACAATTCCAGGTGTTGATTTGGACAAAGTCGGAGAAATTGCAATGACACTTGCT
ATTTTGTATGGTGTCTCAGCTGTGGTTGGTTATATTCAGAACTTTACAGTTGCCACAATCGTTCAACGTTTTTCACAACG
ATTACGTGCAGCTATTCAAGTTAAAATTGACCGTGTTCCACTAAATTATTTTGATAGTCATTCACAAGGTGATACCCTTT
CTCGTGTGACGAACGATGTTGACTTACTTGCTCAATCACTTAACCAAAGTTTGGGAACATTAGTGACTTCTGTTGTGCTT
TTGTTTGGTTCAATTTTCATGATGTTCCACTCAAATGTCAGCATGGCTTTGACAGCTATCGGATCAGTTTTCATTGGTTT
CCTTTTGGTTGTCGTCATTATGGGCTCATCACAACCATTGTTTAAACGTCAACAAAACAACTTGGCAGCAGTCAACGGTT
ATGTCGAAGAAATTTATTCTGGACACAATGTGGTAACAAGTTACAACGCGTCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAACCTTTATAAATCAATGTGGCAATCGCAATTCTTGTCTGGTATTATGATGCCGCTGATGATTTTCATTGG
TAACTTTGGTTACGTTATGGTCTGTGTTGTTGGTGCCGTCAAAGTTATTAACGGTGACATTACAATGGGAGACGTGGTTG
CCTTTATGACTTATGTTCGTATCTTTTCACAACCATTGTCACAAATTGCGCAAGCCTTCACACAAATGCAATCAGCAACT
GCTGCAATGAGCCGCGTCTTTGAGTTCCTTGAAGAAGAAGAAATGGAAGATGATTCTCACAAAGAACGTCAATTGACAGC
TGTTAAAGGTGAGGTTGCCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACGATTATCCATGATTTCTCAGCTG
TTGCTAAACCAGGACAAAAAGTGGCTATCGTTGGACCAACAGGTGCTGGTAAAACAACCATTGTTAATTTGCTTATGAAA
TTCTATGAAATCGATAAAGGTCAAATCTCTATCGATGGTATTGATACTCGTAACATGTCACGAGAAGAAGTTCACGATCA
ATTCTCAATGGTGCTTCAAGATACTTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAACATTA
CTGATGAACAAGTGGTTGCCGCAGCTAAAGCAGTCGGTGTTCACCACTTTATCATGACGCTTCCTGATGGATATGATACT
TATCTTGATGACTCAGTAACCCTTTCAATTGGTCAAAAACAACTTTTGACAATTGCGCGTGCGCTCTTAAAAAATGCTCC
GCTTCTTATCTTGGATGAGGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAGAGCTATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTAATTGCTCACCGTCTATCAACTATTAAAAACGCTGATCTTATCCTTGTTATGAAAGAT
GGTAACATCATCGAACAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.804

100

0.731