Detailed information NTG0352948

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SaO331_RS01625
• Genome accession: NZ_CP038269
• Coordinates: 350108..350611 (+)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain O331 isolate B114
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 345108..355611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SaO331_RS01580 (SaO331_0293)	-	345517..346362 (+)	846	WP_014363379.1	ParB/RepB/Spo0J family partition protein	-
SaO331_RS01585 (SaO331_0294)	-	346516..347397 (+)	882	WP_000373077.1	mechanosensitive ion channel family protein	-
SaO331_RS01590 (SaO331_0295)	-	347427..347630 (+)	204	WP_000157348.1	DUF951 domain-containing protein	-
SaO331_RS01595 (SaO331_0296)	ychF	347642..348739 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
SaO331_RS01600 (SaO331_0297)	-	348955..349176 (+)	222	WP_135830869.1	transposase	-
SaO331_RS01605	-	349217..349327 (+)	111	Protein_306	ATP-binding protein	-
SaO331_RS01610 (SaO331_0298)	-	349383..349547 (-)	165	WP_001052486.1	hypothetical protein	-
SaO331_RS01620 (SaO331_0299)	rpsF	349791..350087 (+)	297	WP_001261460.1	30S ribosomal protein S6	-
SaO331_RS01625 (SaO331_0300)	ssbA	350108..350611 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
SaO331_RS01630 (SaO331_0301)	rpsR	350663..350905 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
SaO331_RS01635 (SaO331_0302)	-	351171..352109 (-)	939	WP_078055966.1	Abi family protein	-
SaO331_RS13680	-	352148..352863 (-)	716	Protein_312	site-specific integrase	-
SaO331_RS01650 (SaO331_0303)	selX	353069..353680 (+)	612	WP_135830876.1	staphylococcal enterotoxin-like toxin X	-
SaO331_RS01655 (SaO331_0304)	-	354049..354417 (+)	369	WP_000849172.1	YxeA family protein	-
SaO331_RS01660 (SaO331_0305)	-	354598..355170 (+)	573	WP_000769719.1	PepSY domain-containing protein	-
SaO331_RS01665 (SaO331_0306)	-	355308..355571 (-)	264	WP_001055897.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=352948 SaO331_RS01625 WP_000934799.1 350108..350611(+) (ssbA) [Staphylococcus aureus strain O331 isolate B114]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=352948 SaO331_RS01625 WP_000934799.1 350108..350611(+) (ssbA) [Staphylococcus aureus strain O331 isolate B114]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAACAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7U7IE99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365