Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   E3983_RS02535 Genome accession   NZ_CP038254
Coordinates   550273..550929 (+) Length   218 a.a.
NCBI ID   WP_135059746.1    Uniprot ID   A0AAX1EEN8
Organism   Legionella israelensis strain HL-0427-4011     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 545273..555929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3983_RS02515 (E3983_02515) - 545711..546673 (-) 963 WP_135059742.1 metal-dependent hydrolase -
  E3983_RS02520 (E3983_02520) - 546675..547451 (-) 777 WP_135059743.1 mechanosensitive ion channel family protein -
  E3983_RS02525 (E3983_02525) - 547520..548944 (-) 1425 WP_135059744.1 HAD-IA family hydrolase -
  E3983_RS02530 (E3983_02530) phhA 549274..550092 (+) 819 WP_135059745.1 phenylalanine 4-monooxygenase -
  E3983_RS02535 (E3983_02535) letA 550273..550929 (+) 657 WP_135059746.1 two-component system response regulator LetA Regulator
  E3983_RS02540 (E3983_02540) uvrC 551154..553013 (+) 1860 WP_135059747.1 excinuclease ABC subunit UvrC -
  E3983_RS02545 (E3983_02545) - 553010..553273 (-) 264 WP_058502537.1 hypothetical protein -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 24695.85 Da        Isoelectric Point: 5.1882

>NTDB_id=352759 E3983_RS02535 WP_135059746.1 550273..550929(+) (letA) [Legionella israelensis strain HL-0427-4011]
MIKVLIVDDHALVRMGIRRLLEDLPDVEVVADAESGEQALLLVKKHFPDVLLLDMKMPGIDGWEVTRRLKKTNPAIKVIA
VTAMSTEPLPARILQLGAMGYLTKESGAEEMASAIRTVAKGKKYLSAEIAQRMAINSLQEQDSPFDRLSEREMQVMLMIT
SGMNVQEIAERLFLSSKTINGYRYRMFDKLEITNDVELTYLAMKHRIIEQPIDFQDES

Nucleotide


Download         Length: 657 bp        

>NTDB_id=352759 E3983_RS02535 WP_135059746.1 550273..550929(+) (letA) [Legionella israelensis strain HL-0427-4011]
TTGATTAAAGTGTTAATTGTTGATGACCATGCTCTGGTTCGGATGGGTATTCGGCGATTATTGGAAGATTTACCTGATGT
TGAGGTCGTAGCCGATGCTGAAAGCGGCGAGCAGGCCTTGTTGTTGGTTAAAAAACATTTTCCGGATGTGCTTCTTCTCG
ACATGAAAATGCCTGGTATTGATGGTTGGGAAGTGACGCGGCGCTTAAAAAAAACCAATCCTGCCATAAAAGTTATCGCA
GTAACGGCGATGAGTACCGAACCTTTGCCTGCCAGAATTTTACAACTTGGAGCCATGGGATATTTGACAAAAGAGTCTGG
GGCAGAGGAAATGGCTTCTGCCATTCGTACGGTCGCCAAAGGCAAAAAATACCTCAGTGCTGAGATTGCCCAGAGAATGG
CGATAAACAGCCTTCAAGAGCAGGATTCTCCTTTTGATCGTTTGTCTGAACGAGAAATGCAAGTCATGCTGATGATAACA
AGCGGCATGAATGTCCAGGAGATTGCTGAACGTTTGTTTTTAAGCTCTAAAACCATTAATGGTTACCGATATCGCATGTT
TGATAAACTGGAAATCACTAATGATGTGGAACTGACTTATTTGGCGATGAAACATCGCATCATTGAACAACCGATTGATT
TTCAGGACGAAAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

85.845

100

0.862

  letA Legionella pneumophila strain ERS1305867

85.845

100

0.862


Multiple sequence alignment