Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   E3U39_RS14075 Genome accession   NZ_CP038028
Coordinates   2833193..2835496 (+) Length   767 a.a.
NCBI ID   WP_134482467.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain FS1092     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2828193..2840496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3U39_RS14045 (E3U39_14045) - 2829749..2830972 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  E3U39_RS14050 (E3U39_14050) - 2830979..2831320 (-) 342 WP_007408677.1 hypothetical protein -
  E3U39_RS14060 (E3U39_14060) degQ 2831783..2831923 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  E3U39_RS14065 (E3U39_14065) comQ 2832054..2833040 (+) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  E3U39_RS14070 (E3U39_14070) comX 2833003..2833173 (+) 171 WP_003152048.1 competence pheromone ComX Regulator
  E3U39_RS14075 (E3U39_14075) comP 2833193..2835496 (+) 2304 WP_134482467.1 histidine kinase Regulator
  E3U39_RS14080 (E3U39_14080) comA 2835577..2836221 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  E3U39_RS14085 (E3U39_14085) - 2836243..2836626 (+) 384 WP_053574130.1 hotdog fold thioesterase -
  E3U39_RS14090 (E3U39_14090) mnhG 2836666..2837040 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  E3U39_RS14095 (E3U39_14095) - 2837024..2837308 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  E3U39_RS14100 (E3U39_14100) - 2837308..2837784 (-) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  E3U39_RS14105 (E3U39_14105) - 2837790..2839271 (-) 1482 WP_053574131.1 Na+/H+ antiporter subunit D -
  E3U39_RS14110 (E3U39_14110) - 2839264..2839605 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  E3U39_RS14115 (E3U39_14115) - 2839605..2840036 (-) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 89057.57 Da        Isoelectric Point: 8.5625

>NTDB_id=351605 E3U39_RS14075 WP_134482467.1 2833193..2835496(+) (comP) [Bacillus amyloliquefaciens strain FS1092]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEIPWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=351605 E3U39_RS14075 WP_134482467.1 2833193..2835496(+) (comP) [Bacillus amyloliquefaciens strain FS1092]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGCATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCATTAATAC
ACCGAGACTGACACGGGATGAGATTCCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCTCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGA
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(567-636)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

72.857

100

0.731


Multiple sequence alignment