Detailed information NTG0351390

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: GL189_RS09310
• Genome accession: NZ_CP046360
• Coordinates: 1822960..1823859 (-)
• Length: 299 a.a.
• NCBI ID: WP_024477664.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 574
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1817960..1828859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL189_RS09285 (GL189_09445)	rsmA	1818185..1819057 (-)	873	WP_001216852.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
GL189_RS09290 (GL189_09450)	-	1819308..1819601 (-)	294	WP_000333255.1	hypothetical protein	-
GL189_RS09295 (GL189_09455)	-	1819594..1820235 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
GL189_RS09300 (GL189_09460)	-	1820237..1822267 (-)	2031	WP_024477663.1	bacteriocin-associated integral membrane family protein	-
GL189_RS09305 (GL189_09465)	-	1822344..1822640 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
GL189_RS09310 (GL189_09470)	comR	1822960..1823859 (-)	900	WP_024477664.1	helix-turn-helix transcriptional regulator	Regulator
GL189_RS09315 (GL189_09475)	rnmV	1823931..1824491 (-)	561	WP_024477665.1	ribonuclease M5	-
GL189_RS09320 (GL189_09480)	-	1824491..1825264 (-)	774	WP_024477666.1	TatD family hydrolase	-
GL189_RS09325 (GL189_09485)	-	1825569..1826288 (-)	720	Protein_1841	DUF1542 domain-containing protein	-
GL189_RS09330 (GL189_09490)	rpmH	1826497..1826631 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
GL189_RS09335 (GL189_09495)	-	1826776..1827990 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
GL189_RS09340 (GL189_09500)	-	1828146..1828439 (-)	294	WP_000977366.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35337.14 Da
• Isoelectric Point: 4.9064

>NTDB_id=351390 GL189_RS09310 WP_024477664.1 1822960..1823859(-) (comR) [Streptococcus pneumoniae strain 574]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=351390 GL189_RS09310 WP_024477664.1 1822960..1823859(-) (comR) [Streptococcus pneumoniae strain 574]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus mutans UA159	37.415	98.328	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361