Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   AHTJR_RS15005 Genome accession   NZ_CP038009
Coordinates   3203679..3204809 (+) Length   376 a.a.
NCBI ID   WP_134252996.1    Uniprot ID   A0A4P7B9U4
Organism   Acinetobacter haemolyticus strain TJR01     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3198679..3209809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJR_RS14985 (AHTJR_14985) - 3199232..3201328 (-) 2097 WP_134252995.1 TonB-dependent copper receptor -
  AHTJR_RS14990 (AHTJR_14990) - 3201402..3201839 (-) 438 WP_113997858.1 DUF2946 family protein -
  AHTJR_RS14995 (AHTJR_14995) def 3201860..3202390 (-) 531 WP_004637502.1 peptide deformylase -
  AHTJR_RS15000 (AHTJR_15000) tsaP 3202516..3203667 (+) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AHTJR_RS15005 (AHTJR_15005) dprA 3203679..3204809 (+) 1131 WP_134252996.1 DNA-processing protein DprA Machinery gene
  AHTJR_RS15010 (AHTJR_15010) - 3204847..3205416 (+) 570 WP_004637499.1 Sua5/YciO/YrdC/YwlC family protein -
  AHTJR_RS15015 (AHTJR_15015) - 3205792..3206712 (-) 921 WP_134252997.1 DMT family transporter -
  AHTJR_RS15020 (AHTJR_15020) - 3206815..3207462 (-) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -
  AHTJR_RS15025 (AHTJR_15025) - 3207609..3208832 (+) 1224 WP_134252998.1 MFS transporter -
  AHTJR_RS15030 (AHTJR_15030) - 3208844..3209617 (+) 774 WP_004637494.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41873.48 Da        Isoelectric Point: 6.5720

>NTDB_id=351258 AHTJR_RS15005 WP_134252996.1 3203679..3204809(+) (dprA) [Acinetobacter haemolyticus strain TJR01]
MLNQLLPHHYSTVLVWYLVQHSLSSFQKIIDYFGDCEQATQTERFSEWQQLGLHANHLKRLAEFQTPEGQQQFAQLVKLI
CQHSDFILTPEDIGYPTQLLPYSDHPPILFGQGNPHALLQPQIAMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDHAAHQGGLAHQRTIAVVGTGLDRVYPAQHVQLAQQIAQSGAIISEFLPSTMPLQQHFPRRNRIVSGLSLGVVVVEAAI
KSGSLITANQAASQGKMVFAIPGHIYSEHHQGCHQLIREGAILVDHPEQVIEDLALPTQWQSEQQSSEKSSNAAPNLPSH
LVGLYQCLDWVGQDIDQLTQQQQSNIAELTSHLMELELLGLCTQQGGRYLRCRPML

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=351258 AHTJR_RS15005 WP_134252996.1 3203679..3204809(+) (dprA) [Acinetobacter haemolyticus strain TJR01]
ATGTTGAACCAATTATTACCTCACCATTACTCTACCGTGCTGGTGTGGTATTTGGTTCAACATTCACTTTCTAGCTTTCA
AAAAATTATCGACTATTTTGGTGATTGCGAACAGGCCACCCAAACTGAGCGTTTTTCTGAGTGGCAACAACTGGGCTTAC
ATGCCAATCATTTAAAACGTTTAGCTGAATTTCAAACACCTGAAGGGCAACAACAATTTGCTCAGCTAGTAAAATTAATC
TGTCAACATAGTGATTTTATTTTAACACCCGAAGATATTGGTTATCCGACACAACTACTCCCTTACTCAGACCATCCACC
GATACTTTTTGGACAAGGGAATCCACACGCTTTATTACAACCACAAATCGCGATGGTAGGAAGCCGCAAACCGAGTCCTC
ATGGGCGCCAAGTCGCTTATGATTTTGCGTATTATTTAAGTGAAAAAGGTTTTTATATTAGTAGTGGTCTAGCCCATGGT
ATTGATCATGCTGCACATCAAGGTGGATTGGCTCATCAACGTACCATTGCTGTTGTTGGAACAGGATTAGACCGTGTCTA
TCCAGCTCAACATGTACAACTAGCCCAGCAAATTGCACAGTCGGGTGCTATCATCTCCGAGTTCCTTCCCTCCACTATGC
CTTTACAACAACATTTCCCTCGTCGAAATCGTATCGTCAGTGGTTTAAGTCTTGGTGTAGTTGTAGTTGAAGCTGCAATA
AAAAGTGGTTCTCTTATTACTGCCAATCAGGCGGCTAGCCAAGGAAAAATGGTGTTTGCGATTCCTGGGCATATCTATAG
TGAACATCATCAAGGCTGTCACCAACTCATTCGAGAAGGTGCAATCTTAGTCGATCATCCTGAGCAAGTAATCGAGGACT
TAGCCTTACCTACTCAATGGCAATCTGAACAACAATCCTCAGAAAAATCCTCAAATGCGGCCCCAAACCTTCCCTCGCAC
TTGGTTGGTCTATATCAATGTTTAGACTGGGTTGGACAAGACATAGACCAACTCACACAACAACAGCAAAGCAATATTGC
TGAGCTTACTTCACACCTCATGGAACTTGAGCTATTAGGTTTATGTACACAACAAGGCGGACGCTATTTACGTTGTCGTC
CAATGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4P7B9U4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

73.067

99.734

0.729

  dprA Acinetobacter baumannii strain A118

72.8

99.734

0.726

  dprA Acinetobacter baylyi ADP1

68.158

100

0.689


Multiple sequence alignment