Detailed information NTG0350423

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: FOB91_RS06465
• Genome accession: NZ_CP046328
• Coordinates: 1329012..1330661 (+)
• Length: 549 a.a.
• NCBI ID: WP_012131057.1
• Uniprot ID: A8AZY2
• Organism: Streptococcus gordonii strain FDAARGOS_683
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 1324012..1335661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB91_RS06435 (FOB91_06435)	-	1324157..1324384 (-)	228	WP_012131050.1	hypothetical protein	-
FOB91_RS06440 (FOB91_06440)	-	1324404..1324667 (-)	264	WP_125367710.1	hypothetical protein	-
FOB91_RS06445 (FOB91_06445)	purK	1324669..1325760 (-)	1092	WP_012131052.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
FOB91_RS06450 (FOB91_06450)	purE	1325747..1326235 (-)	489	WP_012131053.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
FOB91_RS06455 (FOB91_06455)	-	1326255..1327448 (-)	1194	WP_012131054.1	ATP-grasp domain-containing protein	-
FOB91_RS06460 (FOB91_06460)	purD	1327508..1328767 (-)	1260	WP_012131055.1	phosphoribosylamine--glycine ligase	-
FOB91_RS06465 (FOB91_06465)	lytF	1329012..1330661 (+)	1650	WP_012131057.1	GBS Bsp-like repeat-containing protein	Regulator
FOB91_RS06470 (FOB91_06470)	comB	1330780..1332138 (-)	1359	WP_012131059.1	competence pheromone export protein ComB	Regulator
FOB91_RS06475 (FOB91_06475)	comA	1332148..1334301 (-)	2154	WP_012131060.1	peptide cleavage/export ABC transporter ComA	Regulator
FOB91_RS06480 (FOB91_06480)	rpsD	1334755..1335366 (-)	612	WP_008810013.1	30S ribosomal protein S4	-

Sequence

Protein

• Length: 549 a.a.
• Molecular weight: 60540.38 Da
• Isoelectric Point: 9.1621

>NTDB_id=350423 FOB91_RS06465 WP_012131057.1 1329012..1330661(+) (lytF) [Streptococcus gordonii strain FDAARGOS_683]
MKKYKNFLLLSATLLTSLSAPLAAANEQFSPSQLTAMTSEVYVQLEGQTAIVQYQPTAAQEAYTIQHAVWSEEGGQDDIV
WYSADQSTTRIDLSQHKGQGKFLIETYLNVNSVKYHLSSKSVFLNKPVQSTEKTVPEQQDSTSSNNATPQAPAEPKPTNP
APTPAPAPATNRVENPRNSYPKVEERNKSLPPQKVAQPKVAPPQAEPNNNKPLQASAARVPAEPVRDSKPLISITNINKE
NGTYTVRVQENPYSKKIKSVQVPIWSTANQSNLKWYEASKIGNGSFSVQFDIRNHQQIYGNYINHVYITYEDGSRVGYVA
ENVNLPQPAPQPLTPSLQVVHKGQSTYQVILQNSFGDGHILFPIWSDINGQDDLRWYTANSLGNGRYSLDFNANNHIGDG
LYHVHVYRQSGGKVTGVMASNFQVTRPTVAVRKPLNHTTDPSNTYPVGECTWGAKALAPWAGNWWGNGGDWAASARRAGF
RVGSTPQVGAIACWTDGGYGHVGVVTHVDSHKRIQIQESNYAGQRYIANFRGWFDPTIAQGTVSYIYPN

Nucleotide

• Length: 1650 bp

>NTDB_id=350423 FOB91_RS06465 WP_012131057.1 1329012..1330661(+) (lytF) [Streptococcus gordonii strain FDAARGOS_683]
ATGAAAAAATACAAAAATTTCTTACTGCTTTCAGCAACCTTGTTGACCTCACTATCTGCTCCATTAGCTGCAGCGAATGA
ACAGTTTAGCCCATCCCAACTGACGGCTATGACCAGCGAAGTTTACGTTCAGCTTGAAGGACAAACAGCGATTGTTCAGT
ACCAACCGACCGCTGCGCAAGAAGCTTATACCATCCAACATGCCGTCTGGTCTGAGGAGGGAGGCCAAGACGATATTGTC
TGGTATTCAGCTGATCAAAGCACGACCAGGATTGACTTGTCTCAACACAAGGGCCAGGGTAAATTTCTCATCGAGACTTA
TCTCAATGTGAATAGTGTCAAATATCACTTGAGTAGTAAATCGGTCTTTCTAAACAAGCCGGTTCAATCAACCGAAAAAA
CTGTCCCTGAACAGCAAGACAGCACTTCGTCTAACAATGCCACACCTCAAGCACCGGCTGAGCCAAAACCAACTAACCCA
GCACCTACTCCAGCTCCGGCTCCCGCGACCAATAGAGTTGAAAATCCTCGGAACTCCTATCCAAAAGTCGAAGAGCGAAA
CAAATCTCTTCCTCCTCAAAAGGTAGCTCAACCAAAGGTGGCGCCCCCTCAGGCAGAGCCAAACAACAACAAACCTCTGC
AAGCTTCAGCTGCTAGAGTACCGGCAGAGCCTGTCAGAGACAGCAAGCCACTCATCAGTATTACCAACATTAATAAGGAA
AATGGAACCTATACCGTAAGGGTCCAAGAAAACCCTTATTCCAAGAAAATTAAAAGTGTGCAGGTGCCTATTTGGAGCAC
CGCAAATCAAAGCAATCTTAAATGGTATGAGGCTTCAAAGATAGGTAACGGAAGCTTTTCTGTTCAATTCGACATCCGAA
ATCACCAGCAGATTTACGGCAACTATATCAATCACGTCTACATTACCTATGAAGACGGTAGCCGAGTTGGCTATGTTGCT
GAAAATGTCAATCTGCCTCAGCCAGCACCCCAACCACTAACTCCGAGTCTGCAAGTGGTTCATAAAGGCCAATCGACCTA
TCAAGTTATCTTACAAAATAGTTTCGGTGACGGCCATATCCTCTTCCCCATCTGGTCAGATATTAATGGCCAAGACGACC
TCCGCTGGTATACAGCTAATTCTCTTGGTAATGGGCGCTATTCGTTAGATTTCAACGCCAACAATCATATCGGTGACGGT
CTCTATCATGTCCATGTCTATCGACAATCTGGCGGGAAAGTAACGGGTGTCATGGCCTCTAATTTTCAAGTAACACGCCC
AACGGTAGCTGTGAGAAAACCTCTTAACCATACGACCGACCCAAGTAATACTTACCCTGTTGGTGAATGCACATGGGGTG
CCAAGGCTCTCGCTCCTTGGGCAGGAAACTGGTGGGGAAATGGTGGGGACTGGGCAGCCAGTGCTCGCCGAGCAGGATTC
CGTGTAGGATCCACACCTCAGGTCGGAGCCATTGCCTGCTGGACTGACGGTGGATACGGACATGTCGGCGTCGTCACGCA
TGTTGATTCACATAAGCGTATCCAAATTCAGGAATCCAACTACGCTGGACAGCGCTATATCGCTAATTTCCGTGGCTGGT
TTGACCCAACCATCGCTCAGGGCACGGTTTCCTATATCTACCCAAATTAA

Domains

Predicted by InterProScan.

• CHAP domain (CHAP) (443-520)

• GBS Bsp-like repeat (GBS_Bsp-like) (342-414)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-319)

• GBS Bsp-like repeat (GBS_Bsp-like) (53-116)

3D structure

• AlphaFold DB: A8AZY2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii str. Challis substr. CH1	100	100	1
lytF	Streptococcus gordonii strain NCTC7865	95.446	100	0.954