Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   A0073_RS08255 Genome accession   NZ_CP037747
Coordinates   1533403..1534047 (+) Length   214 a.a.
NCBI ID   WP_131937581.1    Uniprot ID   -
Organism   Campylobacter helveticus strain 2013D-9613     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1528403..1539047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0073_RS08230 (A0073_08230) - 1528434..1529375 (-) 942 WP_082200784.1 OmpA family protein -
  A0073_RS08235 (A0073_08235) - 1529362..1530735 (-) 1374 WP_131937577.1 MotA/TolQ/ExbB proton channel family protein -
  A0073_RS08240 (A0073_08240) fbaA 1530811..1531875 (-) 1065 WP_082200490.1 class II fructose-bisphosphate aldolase -
  A0073_RS08245 (A0073_08245) - 1531875..1532690 (-) 816 WP_082200489.1 peptidylprolyl isomerase -
  A0073_RS08250 (A0073_08250) nth 1532771..1533406 (+) 636 WP_131937579.1 endonuclease III -
  A0073_RS08255 (A0073_08255) CJE1441 1533403..1534047 (+) 645 WP_131937581.1 DNA/RNA non-specific endonuclease Regulator
  A0073_RS08260 (A0073_08260) - 1534047..1534661 (+) 615 WP_082200486.1 trimeric intracellular cation channel family protein -
  A0073_RS08265 (A0073_08265) - 1534661..1534864 (+) 204 WP_082200485.1 EexN family lipoprotein -
  A0073_RS10885 - 1534950..1535081 (+) 132 WP_270976649.1 hypothetical protein -
  A0073_RS10735 - 1535497..1535643 (-) 147 WP_159445016.1 hypothetical protein -
  A0073_RS08270 (A0073_08270) - 1535701..1537506 (-) 1806 WP_131937583.1 Na/Pi symporter -
  A0073_RS08275 (A0073_08275) - 1537517..1537951 (-) 435 WP_082200482.1 hypothetical protein -
  A0073_RS08280 (A0073_08280) - 1537948..1538274 (-) 327 WP_131937585.1 rhodanese-like domain-containing protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 25516.50 Da        Isoelectric Point: 9.6801

>NTDB_id=349891 A0073_RS08255 WP_131937581.1 1533403..1534047(+) (CJE1441) [Campylobacter helveticus strain 2013D-9613]
MRILILLTIFTLSLFAKYELDEEFKGYFNQLNCSIILDKFYYINCYDYNLKGSKALAYEVKAENLKLEQIKKRPRFEEDF
ALAKKYRSRWEDYKNSSYSRGHIAPNASFSYSVASQKAVFLMSNITPQNFQINNKIWNDIEKRERKLALKFQKLDVLNLI
LYNENPKRIKNHIAIPSFYIKIFKTKNYKECYKVPNHNIDDENIVAYKISCEAF

Nucleotide


Download         Length: 645 bp        

>NTDB_id=349891 A0073_RS08255 WP_131937581.1 1533403..1534047(+) (CJE1441) [Campylobacter helveticus strain 2013D-9613]
ATGAGAATTTTAATTTTACTAACCATTTTTACCCTTAGCCTTTTTGCAAAATATGAGCTAGATGAGGAATTTAAGGGCTA
TTTTAATCAACTAAATTGCTCTATTATTTTGGATAAATTTTATTATATTAATTGTTACGATTATAATTTAAAGGGTTCAA
AAGCCCTAGCATATGAAGTGAAAGCAGAAAATTTAAAACTAGAGCAAATCAAAAAAAGACCAAGATTTGAAGAGGACTTT
GCTCTTGCTAAAAAATATAGAAGTCGGTGGGAAGATTATAAAAATAGCTCTTATAGTAGAGGACATATAGCGCCAAACGC
CTCTTTTAGCTACTCCGTTGCTTCGCAAAAGGCTGTATTTTTGATGAGTAATATTACCCCACAAAATTTTCAAATTAATA
ATAAAATTTGGAATGATATAGAAAAAAGAGAAAGAAAACTTGCCCTTAAATTTCAAAAATTGGATGTTTTAAATCTCATA
CTTTATAATGAAAACCCTAAACGCATTAAAAATCACATCGCTATCCCTAGTTTTTACATCAAAATTTTTAAAACTAAAAA
TTACAAAGAATGCTATAAAGTGCCAAATCATAATATTGATGATGAAAACATCGTAGCTTATAAAATTTCTTGTGAAGCTT
TTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

60

93.458

0.561
  CJE0566 Campylobacter jejuni RM1221

60.606

92.523

0.561

Multiple sequence alignment