Detailed information NTG0349706

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: GJ664_RS05905
• Genome accession: NZ_CP046037
• Coordinates: 1220835..1221836 (+)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain CBA3614
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1215835..1226836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJ664_RS05880 (GJ664_05880)	-	1216084..1216980 (-)	897	WP_016264673.1	DUF368 domain-containing protein	-
GJ664_RS05885 (GJ664_05885)	-	1217005..1217892 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
GJ664_RS05890 (GJ664_05890)	-	1218050..1218484 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
GJ664_RS05895 (GJ664_05895)	-	1218490..1218927 (+)	438	WP_016264675.1	YtxH domain-containing protein	-
GJ664_RS05900 (GJ664_05900)	-	1219521..1220618 (-)	1098	WP_016264676.1	M24 family metallopeptidase	-
GJ664_RS05905 (GJ664_05905)	ccpA	1220835..1221836 (+)	1002	WP_016264677.1	catabolite control protein A	Regulator
GJ664_RS05910 (GJ664_05910)	-	1221884..1224439 (-)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
GJ664_RS05915 (GJ664_05915)	-	1224723..1225430 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
GJ664_RS05920 (GJ664_05920)	-	1225636..1226340 (-)	705	WP_035147031.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=349706 GJ664_RS05905 WP_016264677.1 1220835..1221836(+) (ccpA) [Latilactobacillus sakei strain CBA3614]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=349706 GJ664_RS05905 WP_016264677.1 1220835..1221836(+) (ccpA) [Latilactobacillus sakei strain CBA3614]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565