Detailed information NTG0348483

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EYC23_RS05380
• Genome accession: NZ_CP036385
• Coordinates: 1126273..1127073 (-)
• Length: 266 a.a.
• NCBI ID: WP_000841124.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 103A4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1121273..1132073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYC23_RS05335	-	1122041..1122826 (-)	786	WP_000488071.1	hypothetical protein	-
EYC23_RS05340	-	1122826..1123212 (-)	387	WP_000397472.1	DUF1294 domain-containing protein	-
EYC23_RS05345	-	1123215..1123412 (+)	198	WP_001116510.1	hypothetical protein	-
EYC23_RS05350	-	1123551..1123817 (-)	267	WP_001987464.1	hypothetical protein	-
EYC23_RS05355	-	1123901..1124239 (-)	339	WP_033587433.1	glycoside hydrolase family protein	-
EYC23_RS05360	-	1124250..1124810 (-)	561	WP_000037133.1	hypothetical protein	-
EYC23_RS05365	-	1124794..1125132 (-)	339	WP_000699920.1	hypothetical protein	-
EYC23_RS05370	-	1125263..1125814 (-)	552	WP_000892207.1	tetratricopeptide repeat protein	-
EYC23_RS05375	dprB	1125872..1126276 (-)	405	WP_000599206.1	Holliday junction resolvase RuvX	Machinery gene
EYC23_RS05380	dprA	1126273..1127073 (-)	801	WP_000841124.1	DNA-processing protein DprA	Machinery gene
EYC23_RS05385	minE	1127080..1127313 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
EYC23_RS05390	minD	1127310..1128116 (-)	807	WP_001019032.1	septum site-determining protein MinD	-
EYC23_RS05395	ilvC	1128140..1129132 (-)	993	WP_001207741.1	ketol-acid reductoisomerase	-
EYC23_RS05405	-	1129381..1130163 (+)	783	WP_001168309.1	NAD+ synthase	-
EYC23_RS05410	-	1130160..1131098 (+)	939	WP_000833970.1	tetraacyldisaccharide 4'-kinase	-
EYC23_RS05415	pseH	1131031..1131573 (-)	543	WP_000742683.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29867.80 Da
• Isoelectric Point: 8.2191

>NTDB_id=348483 EYC23_RS05380 WP_000841124.1 1126273..1127073(-) (dprA) [Helicobacter pylori strain 103A4]
MKSNFQYSALENIPKVFDILKDPPKKLYCVGDTKLLEVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEVY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=348483 EYC23_RS05380 WP_000841124.1 1126273..1127073(-) (dprA) [Helicobacter pylori strain 103A4]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGTCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGTGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGTGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398