Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   GII76_RS09055 Genome accession   NZ_CP045826
Coordinates   1736288..1738336 (+) Length   682 a.a.
NCBI ID   WP_015715873.1    Uniprot ID   -
Organism   Bacillus subtilis strain 73     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1731288..1743336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII76_RS09025 (GII76_09025) spoVM 1731924..1732004 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  GII76_RS09030 (GII76_09030) rpmB 1732077..1732265 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  GII76_RS09035 (GII76_09035) yloU 1732542..1732904 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -
  GII76_RS09040 (GII76_09040) fakA 1732920..1734581 (+) 1662 WP_015715872.1 DAK2 domain-containing protein -
  GII76_RS09045 (GII76_09045) sdaAB 1734720..1735382 (+) 663 WP_003232050.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  GII76_RS09050 (GII76_09050) sdaAA 1735408..1736310 (+) 903 WP_003232049.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  GII76_RS09055 (GII76_09055) recG 1736288..1738336 (+) 2049 WP_015715873.1 ATP-dependent DNA helicase RecG Machinery gene
  GII76_RS09060 (GII76_09060) fapR 1738445..1739011 (+) 567 WP_003232044.1 transcription factor FapR -
  GII76_RS09065 (GII76_09065) plsX 1739025..1740026 (+) 1002 WP_003232041.1 phosphate acyltransferase PlsX -
  GII76_RS09070 (GII76_09070) fabD 1740045..1740998 (+) 954 WP_029726491.1 ACP S-malonyltransferase -
  GII76_RS09075 (GII76_09075) fabG 1740991..1741731 (+) 741 WP_003232035.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  GII76_RS09080 (GII76_09080) acpP 1741815..1742048 (+) 234 WP_003154310.1 acyl carrier protein -
  GII76_RS09085 (GII76_09085) rncS 1742188..1742937 (+) 750 WP_003232030.1 ribonuclease III -

Sequence

Protein


Download         Length: 682 a.a.        Molecular weight: 78176.76 Da        Isoelectric Point: 7.4457

>NTDB_id=348018 GII76_RS09055 WP_015715873.1 1736288..1738336(+) (recG) [Bacillus subtilis strain 73]
MKQHQQTSIANIKGIGPETEKTLHELGIYDISDLLNYFPYRYDDYELRDLEEVKHDERVTVEGKVHSEPSLTYYGKKRNR
LTFRLLVGHYLITAVCFNRPYLKKKLSLGSVVTVSGKWDKHRQNISVQELKNGPHQEDKSIEPVYSVKENVTVKMMRRFI
QQALTQYADSLPDPLPEKLRKSYKLPDYYQALKAMHQPETREALKLARRRFVYEEFLLFQLKMQAFRKAEREQTQGIRQR
FSNEELMRFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVGSGKTAVAAIALYAAILSGYQGALMVPTEILAEQ
HADSLVSLFEKWDVSVALLTSSVKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRN
KGQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLDRILAFVEKELKQGRQAYIICPLIEESD
KLDVQNAIDVYNMLSDIFRGKWNVGLMHGKLHSDEKDQVMREFSANHCQILVSTTVVEVGVNVPNATIMVIYDADRFGLS
QLHQLRGRVGRGEHQSFCILMADPKSETGKERMRIMSETNDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARQDAANLVASDAFWKEPEYAVLRDELLKSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=348018 GII76_RS09055 WP_015715873.1 1736288..1738336(+) (recG) [Bacillus subtilis strain 73]
GTGAAACAACATCAGCAAACTAGTATAGCTAACATTAAGGGTATTGGGCCGGAAACAGAAAAAACATTACACGAACTCGG
TATTTATGACATTTCTGATCTTCTGAATTATTTCCCTTATCGCTATGATGACTACGAGCTGAGGGATTTAGAAGAAGTAA
AGCATGATGAAAGAGTCACAGTCGAAGGGAAGGTTCATTCAGAGCCTTCTCTTACCTATTACGGAAAAAAACGAAACAGG
CTGACATTCAGGCTTCTGGTCGGCCACTATTTAATCACAGCCGTATGTTTTAACCGGCCTTATTTGAAGAAGAAGCTTTC
GCTCGGCTCTGTGGTGACGGTTTCAGGTAAATGGGACAAGCACCGCCAAAACATCTCTGTTCAGGAGTTGAAAAACGGGC
CGCATCAAGAAGACAAAAGCATTGAACCAGTGTATTCTGTGAAAGAAAATGTTACCGTCAAAATGATGAGGCGCTTTATT
CAGCAGGCGCTGACCCAATATGCAGACTCACTTCCTGATCCTCTTCCGGAAAAGCTAAGAAAAAGCTATAAACTGCCTGA
CTATTATCAAGCGTTAAAAGCAATGCACCAGCCTGAAACAAGGGAAGCATTAAAGCTTGCCAGACGGCGGTTTGTTTATG
AAGAATTTTTGTTGTTTCAGTTGAAAATGCAGGCGTTCCGAAAGGCGGAAAGAGAGCAGACACAAGGGATACGGCAGCGT
TTTTCAAACGAAGAACTCATGAGATTTATCAAAAGCCTCCCGTTTCCCCTCACAAACGCCCAGTCACGCGTTCTTCGCGA
AATAACAGCAGACATGTCTTCTCCATACAGAATGAACCGCCTTCTTCAAGGGGACGTTGGATCAGGAAAAACGGCAGTCG
CCGCCATTGCACTGTATGCCGCGATCCTATCCGGATACCAAGGAGCGCTCATGGTGCCGACAGAAATTCTGGCCGAGCAG
CATGCTGATTCGCTCGTTTCGCTATTTGAAAAATGGGACGTCAGCGTTGCTCTTTTGACAAGCTCTGTTAAAGGGAAGCG
GCGAAAAGAACTGCTTGAGCGTCTTGCGGCGGGTGAGATTGATATTCTTGTAGGAACCCACGCTTTAATCCAAGACGAGG
TGGAGTTTAAGGCGCTGAGTCTCGTTATTACAGATGAACAGCACAGATTTGGAGTTGAGCAGCGCAAAAAGCTTCGGAAC
AAAGGGCAGGATCCCGATGTTCTCTTTATGACAGCCACTCCAATCCCAAGAACATTAGCGATCACAGTGTTCGGTGAAAT
GGATGTATCTGTCATTGATGAGATGCCGGCTGGACGAAAGAGAATCGAAACCTATTGGGTAAAACATGACATGCTGGATC
GTATATTGGCATTTGTCGAAAAAGAATTAAAGCAAGGCAGGCAGGCTTATATCATCTGTCCGCTGATTGAAGAATCAGAC
AAGCTTGATGTGCAAAACGCTATTGACGTGTACAATATGCTTTCTGATATTTTTCGGGGAAAATGGAATGTCGGCCTTAT
GCATGGAAAGCTGCATTCCGATGAAAAAGACCAGGTCATGAGAGAATTCAGCGCAAATCACTGTCAAATTCTCGTATCAA
CCACTGTTGTGGAGGTTGGCGTGAATGTTCCGAATGCAACAATTATGGTGATTTATGACGCCGACCGTTTCGGGCTATCA
CAGCTTCACCAGCTGCGCGGCCGTGTTGGACGGGGTGAGCATCAATCTTTCTGTATTCTGATGGCTGATCCAAAATCAGA
AACAGGGAAAGAACGGATGAGGATCATGTCGGAGACCAATGACGGTTTCGAGCTGTCTGAAAAGGATCTGGAACTGAGAG
GTCCCGGTGATTTCTTCGGGAAAAAACAAAGCGGAATGCCGGAATTTAAAGTGGCGGACATGGTTCATGATTACAGAGCG
CTTGAAACGGCAAGGCAGGATGCTGCGAATCTTGTGGCTTCTGACGCGTTCTGGAAGGAGCCGGAATACGCTGTGTTAAG
AGATGAATTGCTGAAGAGCGGAGTAATGGACGGGGAAAAATTAAGCTGA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(452-572)

RecG wedge domain (RecG_wedge)

(9-165)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(599-670)

DEAD/DEAH box helicase (DEAD)

(260-415)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

99.707

100

0.997
  recG/mmsA Streptococcus pneumoniae R6

49.558

99.413

0.493
  recG/mmsA Streptococcus pneumoniae R36A

49.558

99.413

0.493
  recG Neisseria meningitidis strain C311

39.542

96.041

0.38