Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KAN02_RS15755 Genome accession   NZ_CP036171
Coordinates   3270838..3271248 (-) Length   136 a.a.
NCBI ID   WP_087606332.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN02     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3265838..3276248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN02_RS15725 (KAN02_15725) - 3265924..3266193 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  KAN02_RS15730 (KAN02_15730) rapZ 3266190..3267041 (-) 852 WP_002054547.1 RNase adapter RapZ -
  KAN02_RS15735 (KAN02_15735) panC 3267064..3267912 (-) 849 WP_002054580.1 pantoate--beta-alanine ligase -
  KAN02_RS15740 (KAN02_15740) panB 3267916..3268725 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  KAN02_RS15745 (KAN02_15745) folK 3268771..3269252 (-) 482 Protein_3045 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  KAN02_RS15750 (KAN02_15750) pcnB 3269249..3270712 (-) 1464 WP_031982040.1 polynucleotide adenylyltransferase PcnB -
  KAN02_RS15755 (KAN02_15755) comEA 3270838..3271248 (-) 411 WP_087606332.1 ComEA family DNA-binding protein Machinery gene
  KAN02_RS15760 (KAN02_15760) mazG 3271217..3272023 (-) 807 WP_087606331.1 nucleoside triphosphate pyrophosphohydrolase -
  KAN02_RS15765 (KAN02_15765) - 3272136..3272909 (+) 774 WP_087606330.1 SDR family oxidoreductase -
  KAN02_RS15770 (KAN02_15770) - 3272953..3275259 (-) 2307 WP_004698623.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15581.98 Da        Isoelectric Point: 10.2031

>NTDB_id=347300 KAN02_RS15755 WP_087606332.1 3270838..3271248(-) (comEA) [Acinetobacter nosocomialis strain KAN02]
MRYSMILWKNNCFILMMLCLGVISPSVFAQSFDQNFQEWKAKQQMYDQKLNVSKSSHSYGSKIYQTKSLNDSTGQIHLNQ
ATVNEFRQLKGIGEKKAQAIVEYRQKNGGFKNIDEIKNVKGIGPAIFEKNKSHLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=347300 KAN02_RS15755 WP_087606332.1 3270838..3271248(-) (comEA) [Acinetobacter nosocomialis strain KAN02]
ATGCGATACAGCATGATACTTTGGAAAAATAATTGTTTTATTTTAATGATGTTGTGCTTAGGTGTGATTTCACCTTCGGT
TTTTGCTCAATCGTTTGATCAGAATTTTCAGGAATGGAAGGCTAAACAGCAGATGTACGACCAAAAGTTAAACGTCTCTA
AATCTTCTCATTCTTATGGTTCTAAAATTTATCAAACGAAGAGTTTAAATGATTCTACTGGGCAGATTCATTTAAATCAG
GCTACTGTAAATGAGTTTCGGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTGGAATACAGGCAAAAGAA
TGGTGGTTTTAAAAATATTGATGAAATTAAAAACGTCAAAGGAATCGGCCCCGCTATTTTTGAAAAAAATAAATCACATT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

86.029

100

0.86
  comEA Acinetobacter baumannii D1279779

86.029

100

0.86
  comEA Acinetobacter baylyi ADP1

47.748

81.618

0.39

Multiple sequence alignment