Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW55_RS26350 | Genome accession | NZ_CP036121 |
| Coordinates | 5132868..5133152 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain JAS635 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5127868..5138152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW55_RS26315 (EXW55_26790) | tmk | 5128022..5128648 (+) | 627 | WP_215560136.1 | dTMP kinase | - |
| EXW55_RS26320 (EXW55_26795) | holB | 5128684..5129667 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| EXW55_RS26325 (EXW55_26800) | - | 5129673..5130500 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW55_RS26330 (EXW55_26805) | yabA | 5130515..5130865 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW55_RS26335 (EXW55_26810) | - | 5130986..5131726 (+) | 741 | WP_002029328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW55_RS26340 (EXW55_26815) | - | 5131713..5132003 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW55_RS26345 (EXW55_26820) | rsmI | 5131972..5132847 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW55_RS26350 (EXW55_26825) | abrB | 5132868..5133152 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW55_RS26355 (EXW55_26830) | metG | 5133675..5135657 (+) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| EXW55_RS26360 (EXW55_26835) | - | 5135823..5136590 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW55_RS26365 (EXW55_26840) | rnmV | 5136851..5137408 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=347001 EXW55_RS26350 WP_000843037.1 5132868..5133152(-) (abrB) [Bacillus mycoides strain JAS635]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=347001 EXW55_RS26350 WP_000843037.1 5132868..5133152(-) (abrB) [Bacillus mycoides strain JAS635]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |