Detailed information NTG0346501

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: EXW45_RS26920
• Genome accession: NZ_CP036073
• Coordinates: 5212969..5214318 (-)
• Length: 449 a.a.
• NCBI ID: WP_098909950.1
• Uniprot ID: -
• Organism: Bacillus wiedmannii strain JAS08/1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5207969..5219318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW45_RS26900 (EXW45_27395)	secA	5208294..5210801 (-)	2508	WP_098084771.1	preprotein translocase subunit SecA	-
EXW45_RS26905 (EXW45_27400)	raiA	5211076..5211618 (-)	543	WP_000671193.1	ribosome-associated translation inhibitor RaiA	-
EXW45_RS26910 (EXW45_27405)	cspC	5211941..5212138 (-)	198	WP_001990088.1	cold shock protein CspC	-
EXW45_RS26915 (EXW45_27410)	-	5212265..5212969 (-)	705	WP_098704946.1	ComF family protein	-
EXW45_RS26920 (EXW45_27415)	comFA	5212969..5214318 (-)	1350	WP_098909950.1	ATP-dependent helicase ComFA	Machinery gene
EXW45_RS26925 (EXW45_27420)	-	5214446..5215768 (-)	1323	WP_000734336.1	C40 family peptidase	-
EXW45_RS26930 (EXW45_27425)	-	5216021..5216335 (-)	315	WP_000400858.1	helix-turn-helix domain-containing protein	-
EXW45_RS26935 (EXW45_27430)	-	5216508..5217350 (-)	843	WP_000844776.1	DegV family protein	-
EXW45_RS26940 (EXW45_27435)	-	5217590..5218225 (+)	636	WP_000926678.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51096.88 Da
• Isoelectric Point: 9.7556

>NTDB_id=346501 EXW45_RS26920 WP_098909950.1 5212969..5214318(-) (comFA) [Bacillus wiedmannii strain JAS08/1]
MLAGKQLLLEELSSDLRDTLQDLKKKREVVCVQGVKKKASKYMCQRCGNIEQRLFASFLCKRCSRVCTYCRKCITMGRVS
ECAVLVRGIAERKGEKGLNSLQWNGTLSTGQELAAQGVIEAIKKKDSYFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPHINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMVVDEIDAFPYYADHMLKYAVQQAM
KEKAARIYLTATPDEKWKRNFRSGKQKGIIVSGRYHRHPLPVPLFCWCGNWKKSLHQKKIPRFLLQWLEMYVSKKYPIFL
FVPHVRYIEELSLILKTLDPRIDGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHCGKTEAMVRAKRHIQSMNKKAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=346501 EXW45_RS26920 WP_098909950.1 5212969..5214318(-) (comFA) [Bacillus wiedmannii strain JAS08/1]
ATGTTAGCAGGGAAACAGTTACTATTAGAGGAACTCTCTTCAGATTTACGGGATACATTACAAGATTTGAAAAAGAAGAG
AGAGGTCGTATGTGTACAAGGTGTAAAAAAGAAAGCTTCTAAATATATGTGTCAGCGCTGCGGAAATATAGAGCAGCGAC
TATTTGCGTCATTTTTATGTAAAAGGTGTAGTAGAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTGTACTCGTTCGTGGGATCGCTGAAAGAAAAGGAGAAAAAGGTTTAAATTCGTTACAGTGGAACGGGACTTT
GTCTACTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGAAGAAAGACTCTTATTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACTGAAATGCTATTTTACGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGAACAGATGTTGTACTGGAATTAGCACCGAGATTACAAGAAGTGTTTCCACATATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGACCGAGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCATCAACTGTTACGTTACTATAGAGCGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCCTTCCCATATTATGCGGATCATATGTTAAAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCGGCGCGTATTTATTTAACTGCAACTCCAGATGAAAAGTGGAAGCGTAATTTCAGAAGCGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCAGAAAAAAATCCCTCGATTTTTACTACAATGGTTAGAAATGTACGTAAGCAAAAAGTATCCCATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAATTGAGCCTGATATTGAAAACGTTGGATCCTAGAATCGATGGTGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTAGCAGCTTTCAGAAAGGGAGAAATTCCGTTATTAGTTACAACGACAATTTTAG
AGAGAGGAGTAACTGTGAAGAATTTACAAGTTGCGGTGTTAGGGGCGGAAGAAGAAATCTTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGCGAGGTCGTTTATTTTCATTGCGGTAAGACAGAGGC
GATGGTACGCGCGAAAAGGCATATTCAAAGTATGAACAAAAAGGCGAAAGAACAAGGATTAATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	49.321	98.441	0.486
comFA	Latilactobacillus sakei subsp. sakei 23K	41.206	88.641	0.365