Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   GII90_RS08530 Genome accession   NZ_CP045811
Coordinates   1638837..1640885 (+) Length   682 a.a.
NCBI ID   WP_003244692.1    Uniprot ID   O34942
Organism   Bacillus subtilis strain P9_B1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1633837..1645885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII90_RS08500 (GII90_08500) spoVM 1634473..1634553 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  GII90_RS08505 (GII90_08505) rpmB 1634626..1634814 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  GII90_RS08510 (GII90_08510) yloU 1635091..1635453 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -
  GII90_RS08515 (GII90_08515) fakA 1635469..1637130 (+) 1662 WP_003245033.1 DAK2 domain-containing protein -
  GII90_RS08520 (GII90_08520) sdaAB 1637269..1637931 (+) 663 WP_003232050.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  GII90_RS08525 (GII90_08525) sdaAA 1637957..1638859 (+) 903 WP_003232049.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  GII90_RS08530 (GII90_08530) recG 1638837..1640885 (+) 2049 WP_003244692.1 ATP-dependent DNA helicase RecG Machinery gene
  GII90_RS08535 (GII90_08535) fapR 1640994..1641560 (+) 567 WP_003232044.1 transcription factor FapR -
  GII90_RS08540 (GII90_08540) plsX 1641574..1642575 (+) 1002 WP_003232041.1 phosphate acyltransferase PlsX -
  GII90_RS08545 (GII90_08545) fabD 1642594..1643547 (+) 954 WP_003245314.1 ACP S-malonyltransferase -
  GII90_RS08550 (GII90_08550) fabG 1643540..1644280 (+) 741 WP_003232035.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  GII90_RS08555 (GII90_08555) acpP 1644364..1644597 (+) 234 WP_003154310.1 acyl carrier protein -
  GII90_RS08560 (GII90_08560) rncS 1644737..1645486 (+) 750 WP_003232030.1 ribonuclease III -

Sequence


Protein


Download         Length: 682 a.a.        Molecular weight: 78140.72 Da        Isoelectric Point: 7.4260

>NTDB_id=346193 GII90_RS08530 WP_003244692.1 1638837..1640885(+) (recG) [Bacillus subtilis strain P9_B1]
MKQHQQTSIANIKGIGPETEKTLNELGIYDISDLLNYFPYRYDDYELRDLEEVKHDERVTVEGKVHSEPSLTYYGKKRNR
LTFRLLVGHYLITAVCFNRPYLKKKLSLGSVVTVSGKWDKHRQTISVQELKNGPHQEDKSIEPVYSVKENVTVKMMRRFI
QQALTQYADSLPDPLPEKLRKSYKLPDYYQALKAMHQPETREALKLARRRFVYEEFLLFQLKMQAFRKAEREQTQGIRQR
FSNEELMRFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVGSGKTAVAAIALYAAILSGYQGALMVPTEILAEQ
HADSLVSLFEKWDVSVALLTSSVKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRN
KGQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLDRILAFVEKELKQGRQAYIICPLIEESD
KLDVQNAIDVYNMLSDIFRGKWNVGLMHGKLHSDEKDQVMREFSANHCQILVSTTVVEVGVNVPNATIMVIYDADRFGLS
QLHQLRGRVGRGEHQSFCILMADPKSETGKERMRIMSETNDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARQDAANLVASDAFWKEPEYAVLRDELLKSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=346193 GII90_RS08530 WP_003244692.1 1638837..1640885(+) (recG) [Bacillus subtilis strain P9_B1]
GTGAAACAACATCAGCAAACTAGTATAGCTAACATTAAGGGTATTGGGCCGGAAACAGAAAAAACATTGAATGAACTCGG
TATTTATGACATTTCTGATCTTCTGAATTATTTCCCTTATCGCTATGATGACTACGAGCTGAGGGATTTAGAAGAAGTAA
AGCATGATGAAAGAGTCACAGTCGAAGGGAAGGTTCATTCAGAGCCTTCTCTTACCTATTACGGAAAAAAACGAAACAGG
CTGACATTCAGGCTTCTGGTCGGCCACTATTTAATCACAGCCGTATGTTTTAACCGGCCTTATTTGAAGAAGAAGCTTTC
GCTCGGCTCTGTGGTGACGGTTTCAGGTAAATGGGACAAGCACCGCCAAACCATCTCTGTTCAGGAGTTGAAAAACGGGC
CGCATCAAGAAGACAAAAGCATTGAACCAGTGTATTCTGTGAAAGAAAATGTTACCGTCAAAATGATGAGGCGCTTTATT
CAGCAGGCGCTGACCCAATATGCAGACTCACTTCCTGATCCTCTTCCGGAAAAGCTAAGAAAAAGCTATAAACTGCCTGA
CTATTATCAAGCGTTAAAAGCAATGCACCAGCCTGAAACAAGGGAAGCATTAAAGCTTGCCAGACGGCGGTTTGTTTATG
AAGAATTTTTGTTGTTTCAGTTGAAAATGCAGGCGTTCCGAAAGGCGGAAAGAGAGCAGACACAAGGGATACGGCAGCGT
TTTTCAAACGAAGAACTCATGAGATTTATCAAAAGCCTCCCGTTTCCCCTCACAAACGCCCAGTCACGCGTTCTTCGCGA
AATAACAGCAGACATGTCTTCTCCATACAGAATGAACCGTCTTCTTCAAGGGGACGTTGGATCAGGAAAAACGGCAGTCG
CCGCCATTGCACTGTATGCCGCGATCCTATCCGGATACCAAGGAGCGCTCATGGTGCCGACAGAAATTCTGGCCGAGCAG
CATGCTGATTCGCTCGTTTCGCTATTTGAAAAATGGGACGTCAGCGTTGCTCTTTTGACAAGCTCTGTTAAAGGAAAGCG
GCGAAAAGAACTGCTTGAGCGTCTTGCGGCGGGTGAGATTGATATTCTTGTAGGAACCCATGCTTTAATCCAAGACGAGG
TGGAGTTTAAGGCGTTGAGTCTCGTTATTACTGATGAACAGCACAGATTTGGAGTTGAGCAGCGCAAAAAGCTTCGGAAC
AAAGGGCAGGATCCCGATGTTCTCTTTATGACAGCCACTCCAATCCCAAGAACATTAGCGATCACAGTATTCGGTGAAAT
GGATGTATCTGTCATTGATGAGATGCCGGCTGGACGAAAGCGAATTGAAACCTATTGGGTAAAACATGACATGCTTGATC
GTATTTTGGCATTTGTCGAAAAAGAATTAAAGCAAGGCAGGCAGGCTTATATCATCTGTCCGCTGATTGAAGAATCAGAT
AAGCTTGATGTGCAAAACGCCATTGACGTGTACAATATGCTTTCTGATATTTTTCGGGGAAAATGGAATGTCGGCCTTAT
GCATGGAAAGCTGCATTCCGATGAAAAAGATCAGGTCATGAGAGAATTCAGCGCAAATCACTGTCAAATTCTCGTATCAA
CCACTGTTGTGGAGGTTGGCGTAAATGTTCCGAATGCAACAATTATGGTGATTTATGACGCCGACCGTTTCGGACTATCA
CAGCTTCACCAGCTGCGCGGCCGTGTTGGACGGGGTGAGCATCAATCTTTCTGTATTCTGATGGCTGATCCAAAATCAGA
AACAGGGAAAGAACGGATGAGGATCATGTCGGAGACCAATGACGGTTTCGAGCTGTCTGAAAAGGATCTGGAACTGAGAG
GTCCCGGTGATTTCTTCGGGAAAAAACAAAGCGGAATGCCGGAATTTAAAGTGGCGGACATGGTTCATGATTACAGAGCG
CTTGAAACGGCAAGGCAGGATGCTGCGAATCTTGTGGCTTCTGACGCGTTCTGGAAGGAGCCGGAATACGCTGTGTTAAG
AGATGAATTGCTGAAGAGCGGAGTAATGGACGGGGAAAAATTAAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O34942

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

100

100

1

  recG/mmsA Streptococcus pneumoniae R6

48.968

99.413

0.487

  recG/mmsA Streptococcus pneumoniae R36A

48.968

99.413

0.487

  recG Neisseria meningitidis strain C311

39.542

96.041

0.38


Multiple sequence alignment