Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | GHB96_RS05700 | Genome accession | NZ_CP045707 |
| Coordinates | 1098474..1098923 (-) | Length | 149 a.a. |
| NCBI ID | WP_002214937.1 | Uniprot ID | Q9JXJ2 |
| Organism | Neisseria gonorrhoeae strain NG250 | ||
| Function | DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1093474..1103923
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHB96_RS05675 (GHB96_06020) | - | 1094533..1094955 (-) | 423 | WP_003691751.1 | very short patch repair endonuclease | - |
| GHB96_RS11880 | - | 1094961..1095557 (-) | 597 | WP_012503916.1 | TIGR02391 family protein | - |
| GHB96_RS11885 | - | 1095747..1096604 (-) | 858 | WP_012503917.1 | ATP-binding protein | - |
| GHB96_RS05685 (GHB96_06030) | - | 1096618..1097052 (-) | 435 | WP_229684538.1 | DNA cytosine methyltransferase | - |
| GHB96_RS05690 (GHB96_06035) | - | 1096986..1097576 (-) | 591 | WP_080229150.1 | DNA cytosine methyltransferase | - |
| GHB96_RS05695 (GHB96_06040) | - | 1097951..1098097 (+) | 147 | WP_003691757.1 | hypothetical protein | - |
| GHB96_RS05700 (GHB96_06050) | comP | 1098474..1098923 (-) | 450 | WP_002214937.1 | type IV pilin protein | Machinery gene |
| GHB96_RS05705 (GHB96_06055) | comE | 1099011..1099406 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GHB96_RS11890 (GHB96_06060) | - | 1099508..1099627 (-) | 120 | Protein_1134 | competence protein ComE | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16834.81 Da Isoelectric Point: 9.7951
>NTDB_id=345394 GHB96_RS05700 WP_002214937.1 1098474..1098923(-) (comP) [Neisseria gonorrhoeae strain NG250]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
Nucleotide
Download Length: 450 bp
>NTDB_id=345394 GHB96_RS05700 WP_002214937.1 1098474..1098923(-) (comP) [Neisseria gonorrhoeae strain NG250]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comP | Neisseria meningitidis 8013 |
99.329 |
100 |
0.993 |
| comP | Neisseria subflava NJ9703 |
49.66 |
98.658 |
0.49 |