Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C9E88_RS12665 Genome accession   NZ_CP035934
Coordinates   2684467..2684850 (-) Length   127 a.a.
NCBI ID   WP_106985073.1    Uniprot ID   A0A7Y8Q389
Organism   Acinetobacter cumulans strain WCHAc060092     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2679467..2689850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9E88_RS12650 (C9E88_007755) - 2681408..2683480 (-) 2073 WP_106985070.1 methyl-accepting chemotaxis protein -
  C9E88_RS12655 (C9E88_007750) - 2683527..2684063 (-) 537 WP_106985071.1 chemotaxis protein CheW -
  C9E88_RS12660 (C9E88_007745) - 2684070..2684438 (-) 369 WP_106985072.1 response regulator -
  C9E88_RS12665 (C9E88_007740) pilG 2684467..2684850 (-) 384 WP_106985073.1 twitching motility response regulator PilG Regulator
  C9E88_RS12670 (C9E88_007735) - 2685140..2685784 (+) 645 WP_106985074.1 hypothetical protein -
  C9E88_RS12675 (C9E88_007730) - 2685834..2686961 (+) 1128 WP_106985075.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7172

>NTDB_id=345165 C9E88_RS12665 WP_106985073.1 2684467..2684850(-) (pilG) [Acinetobacter cumulans strain WCHAc060092]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=345165 C9E88_RS12665 WP_106985073.1 2684467..2684850(-) (pilG) [Acinetobacter cumulans strain WCHAc060092]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTAATTGACGACTCAAAAACTATTCGCCGTACAGCAGAAACTCTTCT
TCAACGTGAAGGTTGTGAAGTTGTGACTGCAGTAGATGGCTTTGAAGCCTTGTCAAAAATTGCTGAAGCAAATCCAGACA
TTGTGTTTGTTGATATTATGATGCCTCGCTTAGATGGCTACCAAACATGCGCATTAATTAAAAATTCGCAAAATTATCAA
AATATTCCAGTCGTAATGCTGTCAAGTAAAGACGGTTTATTTGATCAGGCGAAAGGCCGTGTCGTGGGTTCAGACGAATA
CCTAACAAAACCATTCAGTAAAGATGAATTATTGAATGCGATTCGTAACCACGTAACTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8Q389

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.026

92.126

0.378
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362

Multiple sequence alignment