Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   C9E88_RS10695 Genome accession   NZ_CP035934
Coordinates   2247940..2248650 (-) Length   236 a.a.
NCBI ID   WP_106986727.1    Uniprot ID   A0A7Y8Q3P0
Organism   Acinetobacter cumulans strain WCHAc060092     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2242940..2253650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9E88_RS10685 (C9E88_009735) clpB 2243654..2246233 (-) 2580 WP_106986728.1 ATP-dependent chaperone ClpB -
  C9E88_RS10690 (C9E88_009730) - 2246661..2247710 (-) 1050 WP_106986732.1 NADP(H)-dependent aldo-keto reductase -
  C9E88_RS10695 (C9E88_009725) crp 2247940..2248650 (-) 711 WP_106986727.1 cAMP-activated global transcriptional regulator CRP Regulator
  C9E88_RS10700 (C9E88_009720) - 2248798..2249226 (+) 429 WP_106986726.1 OsmC family protein -
  C9E88_RS10705 (C9E88_009715) cas6f 2250407..2251024 (-) 618 WP_106986725.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 -
  C9E88_RS10710 (C9E88_009710) - 2251134..2252367 (-) 1234 Protein_2088 IS3 family transposase -
  C9E88_RS10715 (C9E88_009705) - 2252380..2252655 (-) 276 WP_120365968.1 hypothetical protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26646.18 Da        Isoelectric Point: 4.6016

>NTDB_id=345163 C9E88_RS10695 WP_106986727.1 2247940..2248650(-) (crp) [Acinetobacter cumulans strain WCHAc060092]
MTSNFSQLSTDALSPGQLPDSVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFETNAQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEQNNDFTSEEFDDEE

Nucleotide


Download         Length: 711 bp        

>NTDB_id=345163 C9E88_RS10695 WP_106986727.1 2247940..2248650(-) (crp) [Acinetobacter cumulans strain WCHAc060092]
ATGACTTCAAACTTTTCACAACTTAGCACAGATGCACTGTCACCTGGCCAACTACCAGACTCAGTGAAAGCATTATTAAA
ACGTGCATATATCAACCGTTACCCAAAACGTACAACGATCGTTGATGCAGGGTCAGAATCTAAATCTTTGTATTTAATTC
TGAAGGGGTCTGTATCCATCATTCTTCGTGAAGACGATGAGCGTGAAATTGTCGTAGCATATTTAAATGCGGGTGACTTT
TTTGGGGAAATGGGTCTATTCGAAACGAATGCACAACGTACTGCGGAAGTCCGTACGCGCGATGTGTGTGAAATTGCCGA
AGTGACTTATGAAAACTTCCACGAACTCAGCAAGCAATATCCAGACTTGAGCTATGCTGTATTTGCACAGTTGGTCCGTC
GTTTGAAAAATACGACACGTAAAGTGACTGACTTAGCATTTATTGACGTATCAGGCCGTATCGCGCGCTGTTTGATCGAT
CTATCTTCGCAGCCAGAAGCGATGATTCTTCCAAATGGCCGTCAAATCCGTATTACACGTCAAGAAATTGGCCGTATTGT
GGGTTGTTCGCGTGAAATGGTTGGCCGTGTTCTAAAAACGCTTGAAGAACAAGGCATGATCGAAACAGATGGTAAAGCAA
TTCTTATTTTTGATGCTTCATTAGAACAAAATAATGACTTCACATCTGAAGAATTTGATGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8Q3P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

90.678

100

0.907
  crp Vibrio cholerae strain A1552

46.829

86.864

0.407
  crp Haemophilus influenzae Rd KW20

47.692

82.627

0.394

Multiple sequence alignment