Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | CCO2228_RS07370 | Genome accession | NZ_CP035927 |
| Coordinates | 1450224..1450820 (-) | Length | 198 a.a. |
| NCBI ID | WP_002779314.1 | Uniprot ID | A0A0Q2JMT7 |
| Organism | Campylobacter coli strain RM2228 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1445224..1455820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCO2228_RS07345 (CCO2228_1438) | - | 1445386..1446150 (+) | 765 | WP_002779265.1 | TIGR02757 family protein | - |
| CCO2228_RS07350 (CCO2228_1439) | - | 1446153..1446917 (+) | 765 | WP_002784060.1 | TSUP family transporter | - |
| CCO2228_RS07355 (CCO2228_1440) | ctsF | 1446914..1448089 (-) | 1176 | WP_002781160.1 | type II secretion system F family protein | Machinery gene |
| CCO2228_RS07360 (CCO2228_1441) | ctsE | 1448076..1449638 (-) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
| CCO2228_RS07365 (CCO2228_1442) | - | 1449631..1450227 (-) | 597 | WP_002779313.1 | CDC27 family protein | - |
| CCO2228_RS07370 (CCO2228_1443) | ctsP | 1450224..1450820 (-) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| CCO2228_RS07375 (CCO2228_1444) | ctsD | 1450813..1452231 (-) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| CCO2228_RS07380 (CCO2228_1445) | ctsR | 1452209..1452520 (-) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23633.42 Da Isoelectric Point: 9.1569
>NTDB_id=345096 CCO2228_RS07370 WP_002779314.1 1450224..1450820(-) (ctsP) [Campylobacter coli strain RM2228]
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=345096 CCO2228_RS07370 WP_002779314.1 1450224..1450820(-) (ctsP) [Campylobacter coli strain RM2228]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |