Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EWH46_RS01535 Genome accession   NZ_CP035708
Coordinates   278075..278443 (+) Length   122 a.a.
NCBI ID   WP_149505108.1    Uniprot ID   -
Organism   Sphaerotilus sulfidivorans strain D-507     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 273075..283443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EWH46_RS01510 (EWH46_01510) - 273481..274398 (+) 918 WP_149502349.1 ACP S-malonyltransferase -
  EWH46_RS01515 (EWH46_01515) - 274418..275293 (-) 876 WP_149502350.1 D-hexose-6-phosphate mutarotase -
  EWH46_RS01520 (EWH46_01520) hemL 275313..276605 (-) 1293 WP_149502351.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EWH46_RS01525 (EWH46_01525) thiD 276694..277629 (-) 936 WP_149502352.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  EWH46_RS01530 (EWH46_01530) - 277776..277928 (+) 153 WP_037480977.1 rubredoxin -
  EWH46_RS01535 (EWH46_01535) pilG 278075..278443 (+) 369 WP_149505108.1 response regulator Regulator
  EWH46_RS01540 (EWH46_01540) - 278458..278823 (+) 366 WP_037480979.1 response regulator -
  EWH46_RS01545 (EWH46_01545) - 278853..279383 (+) 531 WP_149502353.1 chemotaxis protein CheW -
  EWH46_RS01550 (EWH46_01550) - 279443..281758 (+) 2316 WP_149502354.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 122 a.a.        Molecular weight: 13640.75 Da        Isoelectric Point: 6.4537

>NTDB_id=344009 EWH46_RS01535 WP_149505108.1 278075..278443(+) (pilG) [Sphaerotilus sulfidivorans strain D-507]
MRVLVIDDSNTIRRSAEIFLKQGGCEVVLAEDGFDALAKVSDHRPDLIFCDILMPRLDGYQTCAIIKRNPQFASVPVIML
SSKDGLFDKARGRMVGSEDYLTKPFTKDQLLQAVQQHGRVEA

Nucleotide


Download         Length: 369 bp        

>NTDB_id=344009 EWH46_RS01535 WP_149505108.1 278075..278443(+) (pilG) [Sphaerotilus sulfidivorans strain D-507]
ATGCGGGTGCTGGTCATCGACGACAGCAACACCATTCGCCGCAGCGCCGAGATCTTCCTGAAGCAGGGCGGCTGCGAGGT
GGTGCTGGCCGAGGACGGCTTCGACGCGCTGGCCAAGGTCAGCGACCACCGTCCCGACCTGATCTTCTGCGACATCCTGA
TGCCGCGCCTGGACGGCTACCAGACCTGCGCGATCATCAAGCGCAATCCGCAGTTCGCCAGCGTGCCGGTGATCATGCTG
TCGTCCAAGGACGGGCTGTTCGACAAGGCGCGTGGCCGCATGGTCGGCTCCGAGGACTATCTGACCAAGCCCTTCACCAA
GGACCAGCTGCTGCAGGCCGTGCAGCAGCATGGCCGGGTCGAGGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.393

95.902

0.598
  pilH Synechocystis sp. PCC 6803

41.228

93.443

0.385
  vicR Streptococcus mutans UA159

38.983

96.721

0.377

Multiple sequence alignment