Detailed information NTG0343995

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ELE36_RS03895
• Genome accession: NZ_CP035704
• Coordinates: 907061..908452 (-)
• Length: 463 a.a.
• NCBI ID: WP_129831847.1
• Uniprot ID: -
• Organism: Pseudolysobacter antarcticus strain AQ6-296
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 902061..913452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELE36_RS03880 (ELE36_03880)	-	903007..904968 (-)	1962	WP_165371465.1	hypothetical protein	-
ELE36_RS03885 (ELE36_03885)	-	905349..905786 (-)	438	WP_129831845.1	pilin	-
ELE36_RS03890 (ELE36_03890)	tfpZ	906210..906956 (-)	747	WP_129831846.1	TfpX/TfpZ family type IV pilin accessory protein	-
ELE36_RS03895 (ELE36_03895)	pilR	907061..908452 (-)	1392	WP_129831847.1	sigma-54 dependent transcriptional regulator	Regulator
ELE36_RS03900 (ELE36_03900)	-	908669..910273 (-)	1605	WP_242512351.1	ATP-binding protein	-
ELE36_RS03905 (ELE36_03905)	sucC	910640..911800 (+)	1161	WP_129831848.1	ADP-forming succinate--CoA ligase subunit beta	-
ELE36_RS03910 (ELE36_03910)	sucD	911924..912793 (+)	870	WP_129831849.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 463 a.a.
• Molecular weight: 50157.45 Da
• Isoelectric Point: 6.2592

>NTDB_id=343995 ELE36_RS03895 WP_129831847.1 907061..908452(-) (pilR) [Pseudolysobacter antarcticus strain AQ6-296]
MSKPSALVIDDERDIRELLDITLSRMGLQVDAVGNVADAKQKLATQRYALCLTDMRLPDGSGQELVELIARAHPDTPVAM
ITAHGNMDAAVTALKAGAFDFVSKPVDLGILRRLVQTALKLGESRRGMPVIDAASKLLGNSAAMQLARATIGKLARSQAP
VYISGESGVGKELAARLIHEQGPRASAAFVPVNCGAIPSELMESEFFGHRKGSFTGAHADKDGLFKVAQGGTLFLDEVAE
LPLHMQVKLLRVIQEKAVRPIGGRDEVPVDVRILSATHKNLEALVANNTFRQDLYYRINVIELHMPALRERREDVPLLAA
RVLERLAGGSDAQPKLTPAALAALNAYDFPGNVRELENILERAIALCENGVIEAGDLRLAAQASRTAPNANMSTSAASVD
PEDEDDDDNSNGPVHLDEYISQIERETIEKALLESRYNKTATAKKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1392 bp

>NTDB_id=343995 ELE36_RS03895 WP_129831847.1 907061..908452(-) (pilR) [Pseudolysobacter antarcticus strain AQ6-296]
ATGAGCAAGCCTAGCGCACTGGTCATCGACGACGAGCGCGATATTCGCGAACTGCTGGATATCACTCTTTCACGCATGGG
CTTGCAGGTGGATGCGGTCGGCAATGTTGCCGATGCCAAGCAGAAACTCGCCACGCAGCGCTATGCCTTGTGCCTCACCG
ATATGCGCCTGCCGGATGGCAGCGGCCAAGAGCTGGTCGAGCTGATCGCCCGCGCGCACCCCGACACACCCGTGGCCATG
ATCACCGCGCATGGCAATATGGATGCCGCGGTGACGGCGCTCAAGGCCGGCGCTTTCGACTTTGTTTCCAAGCCGGTCGA
TCTCGGTATTTTGCGTCGTCTGGTGCAAACCGCGCTCAAGCTTGGCGAAAGCCGTCGCGGTATGCCGGTAATTGATGCGG
CCAGCAAATTGCTGGGCAACTCAGCCGCGATGCAACTTGCTCGTGCCACGATCGGCAAACTCGCGCGCAGCCAGGCGCCG
GTTTATATCAGCGGAGAGTCGGGCGTCGGCAAGGAATTGGCCGCGCGCCTGATCCACGAACAGGGCCCGCGCGCGAGCGC
TGCATTCGTCCCCGTGAACTGCGGCGCGATTCCGAGCGAGCTGATGGAGTCCGAATTTTTCGGCCACCGCAAAGGCAGCT
TTACCGGAGCGCACGCCGACAAGGACGGCCTGTTCAAGGTTGCCCAAGGCGGCACGCTGTTCCTCGACGAGGTGGCCGAA
TTGCCGCTGCATATGCAGGTGAAACTGCTGCGCGTGATCCAGGAAAAAGCAGTGCGTCCGATCGGCGGCCGCGATGAAGT
GCCGGTCGATGTGCGCATCCTTTCCGCCACCCACAAAAACCTCGAAGCGCTGGTAGCAAACAATACGTTTCGTCAGGATT
TGTATTACCGCATCAACGTCATCGAACTGCACATGCCCGCGCTGCGCGAGCGCCGCGAAGATGTGCCATTGCTGGCTGCG
CGCGTACTCGAACGTCTGGCCGGCGGCAGTGATGCTCAGCCAAAACTTACGCCTGCGGCGCTCGCCGCGTTGAATGCCTA
CGATTTCCCGGGCAACGTGCGCGAGCTTGAAAATATCCTCGAACGCGCGATTGCCCTGTGCGAAAACGGCGTGATCGAAG
CGGGTGATCTGCGCCTTGCTGCGCAGGCATCGCGCACTGCACCGAATGCAAACATGAGCACGTCAGCCGCTTCCGTCGAT
CCGGAAGATGAGGACGACGACGATAACAGCAATGGCCCCGTGCATCTGGACGAATACATCAGCCAGATCGAGCGCGAAAC
TATCGAAAAAGCCCTGCTCGAAAGCCGCTACAACAAAACCGCCACCGCGAAAAAGCTCGGAATTACCTTTCGCGCACTGC
GCTACAAGCTCAAGAAACTCGGCATCGATTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-460)

• Sigma-54 interaction domain (Sigma54_activat) (137-303)

• Response regulator receiver domain (Response_reg) (7-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.638	100	0.618
pilR	Acinetobacter baumannii strain A118	47.854	100	0.482