Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GB851_RS00280 | Genome accession | NZ_CP045141 |
| Coordinates | 56352..56780 (+) | Length | 142 a.a. |
| NCBI ID | WP_019390096.1 | Uniprot ID | B6SE74 |
| Organism | Kingella kingae strain F41215CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 51352..61780
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GB851_RS00260 (GB851_00270) | - | 52124..52669 (-) | 546 | WP_038310304.1 | gamma carbonic anhydrase family protein | - |
| GB851_RS00265 (GB851_00275) | - | 52709..53443 (-) | 735 | WP_003791735.1 | histidine phosphatase family protein | - |
| GB851_RS00270 (GB851_00280) | recJ | 53660..55372 (-) | 1713 | WP_038310302.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GB851_RS00275 (GB851_00285) | pilE | 55732..56205 (+) | 474 | WP_164538010.1 | pilin | Machinery gene |
| GB851_RS00280 (GB851_00290) | pilE | 56352..56780 (+) | 429 | WP_019390096.1 | pilin | Machinery gene |
| GB851_RS00285 (GB851_00295) | - | 56792..57565 (+) | 774 | WP_164538011.1 | fimb protein | - |
| GB851_RS00295 (GB851_00305) | - | 58015..58905 (-) | 891 | WP_003788327.1 | metal ABC transporter permease | - |
| GB851_RS00300 (GB851_00310) | - | 58941..59333 (-) | 393 | WP_038302564.1 | pyrimidine dimer DNA glycosylase/endonuclease V | - |
| GB851_RS00305 (GB851_00315) | - | 59382..60107 (-) | 726 | WP_038302563.1 | metal ABC transporter ATP-binding protein | - |
| GB851_RS00310 | - | 60110..60268 (-) | 159 | WP_164538012.1 | hypothetical protein | - |
| GB851_RS00315 (GB851_00320) | - | 60423..61268 (-) | 846 | WP_003791720.1 | mechanosensitive ion channel family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14865.01 Da Isoelectric Point: 7.8822
>NTDB_id=343673 GB851_RS00280 WP_019390096.1 56352..56780(+) (pilE) [Kingella kingae strain F41215CHC]
METKMQGFTLIELMIVIAIVGILAALALPTYQDFSVRSRVAEGLSLAGGAKTSVAEYYASHNQFPANNVTAGLATANQIK
GSSVHSLTVTDGVITVVFNNKVAAAGKNSLVLTPSVAKEGSITWDCHGGTLDGRLRPSECRN
METKMQGFTLIELMIVIAIVGILAALALPTYQDFSVRSRVAEGLSLAGGAKTSVAEYYASHNQFPANNVTAGLATANQIK
GSSVHSLTVTDGVITVVFNNKVAAAGKNSLVLTPSVAKEGSITWDCHGGTLDGRLRPSECRN
Nucleotide
Download Length: 429 bp
>NTDB_id=343673 GB851_RS00280 WP_019390096.1 56352..56780(+) (pilE) [Kingella kingae strain F41215CHC]
ATGGAAACTAAAATGCAAGGTTTTACCTTAATTGAATTGATGATTGTTATTGCTATTGTGGGTATTTTAGCTGCGCTGGC
ATTGCCAACGTATCAGGATTTTTCAGTACGCTCGCGTGTGGCAGAAGGATTGAGTTTGGCTGGTGGTGCAAAAACATCGG
TGGCAGAATACTATGCTTCGCATAACCAATTTCCAGCCAATAATGTAACGGCAGGTTTGGCTACAGCCAACCAAATTAAG
GGCAGTTCGGTGCATTCGCTTACGGTAACAGATGGTGTGATTACGGTGGTATTTAATAATAAAGTGGCGGCAGCAGGTAA
AAATTCGCTGGTTTTAACGCCTAGTGTGGCGAAAGAAGGCTCTATTACTTGGGATTGCCACGGTGGTACATTGGACGGCA
GATTGCGTCCATCGGAATGCCGTAATTAA
ATGGAAACTAAAATGCAAGGTTTTACCTTAATTGAATTGATGATTGTTATTGCTATTGTGGGTATTTTAGCTGCGCTGGC
ATTGCCAACGTATCAGGATTTTTCAGTACGCTCGCGTGTGGCAGAAGGATTGAGTTTGGCTGGTGGTGCAAAAACATCGG
TGGCAGAATACTATGCTTCGCATAACCAATTTCCAGCCAATAATGTAACGGCAGGTTTGGCTACAGCCAACCAAATTAAG
GGCAGTTCGGTGCATTCGCTTACGGTAACAGATGGTGTGATTACGGTGGTATTTAATAATAAAGTGGCGGCAGCAGGTAA
AAATTCGCTGGTTTTAACGCCTAGTGTGGCGAAAGAAGGCTCTATTACTTGGGATTGCCACGGTGGTACATTGGACGGCA
GATTGCGTCCATCGGAATGCCGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
40.244 |
100 |
0.465 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40 |
100 |
0.465 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
39.877 |
100 |
0.458 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.935 |
100 |
0.458 |
| pilA2 | Legionella pneumophila str. Paris |
45.324 |
97.887 |
0.444 |
| comP | Acinetobacter baylyi ADP1 |
40.26 |
100 |
0.437 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.604 |
97.887 |
0.437 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.806 |
100 |
0.373 |