Detailed information NTG0343254

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: F8M43_RS15435
• Genome accession: NZ_CP044498
• Coordinates: 2942126..2943130 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain ms-2
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2937126..2948130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F8M43_RS15410	acuA	2938053..2938685 (+)	633	WP_029726417.1	acetoin utilization protein acetyltransferase AcuA	-
F8M43_RS15415	acuB	2938712..2939356 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
F8M43_RS15420	acuC	2939353..2940516 (+)	1164	WP_015251447.1	acetoin utilization protein AcuC	-
F8M43_RS15425	motS	2940527..2941255 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
F8M43_RS15430	motP	2941245..2942063 (-)	819	WP_014477672.1	flagellar motor protein MotP	-
F8M43_RS15435	ccpA	2942126..2943130 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
F8M43_RS15440	aroX	2943406..2944482 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
F8M43_RS15445	ytxJ	2944719..2945045 (-)	327	WP_014480571.1	bacillithiol system redox-active protein YtxJ	-
F8M43_RS15450	ytxH	2945069..2945524 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
F8M43_RS15455	ytxG	2945555..2945977 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
F8M43_RS15460	murC	2946139..2947437 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=343254 F8M43_RS15435 WP_003229285.1 2942126..2943130(-) (ccpA) [Bacillus subtilis strain ms-2]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=343254 F8M43_RS15435 WP_003229285.1 2942126..2943130(-) (ccpA) [Bacillus subtilis strain ms-2]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGAAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503