Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   FSA28_RS08750 Genome accession   NZ_CP044495
Coordinates   1739054..1741069 (-) Length   671 a.a.
NCBI ID   WP_002291872.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1734054..1746069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS08725 (FSA28_1510) - 1734940..1735476 (+) 537 WP_002291875.1 biotin transporter BioY -
  FSA28_RS08730 (FSA28_1511) - 1735574..1736023 (+) 450 WP_002263469.1 universal stress protein -
  FSA28_RS08735 (FSA28_1512) - 1736301..1737686 (-) 1386 WP_002270246.1 Cof-type HAD-IIB family hydrolase -
  FSA28_RS08740 (FSA28_1513) - 1737759..1738718 (+) 960 WP_002291873.1 asparaginase -
  FSA28_RS08745 (FSA28_1514) - 1738747..1738911 (+) 165 WP_002263466.1 hypothetical protein -
  FSA28_RS08750 (FSA28_1515) recG/mmsA 1739054..1741069 (-) 2016 WP_002291872.1 ATP-dependent DNA helicase RecG Machinery gene
  FSA28_RS08755 (FSA28_1516) alr 1741242..1742357 (-) 1116 WP_088741876.1 alanine racemase -
  FSA28_RS08760 (FSA28_1517) acpS 1742354..1742713 (-) 360 WP_002263463.1 holo-ACP synthase -
  FSA28_RS08765 (FSA28_1518) - 1742983..1744017 (-) 1035 WP_002263828.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75376.26 Da        Isoelectric Point: 7.6470

>NTDB_id=343045 FSA28_RS08750 WP_002291872.1 1739054..1741069(-) (recG/mmsA) [Streptococcus mutans strain UA140]
MDLQSSLAVLKGLGPKSAEKFHRLGIYTIEDLLLYYPFRYEDFKAKSVLDLLDGEKAVVTGKVVTPANVQYYGFKRNRLS
FKIKQDEAVIAVSFFNQPYLQDKVELDQDIAIFGKWDQKKSALTGMKILAQVTDDMQPVYHVAQGISQSALIKAIQSVFD
AGYLRFLSENLPQILLDKYRLLDRQTATRAMHFPKDLEEYKQALRRIKFEELFYFQLNLQVLKANNKSESNGLLITYDHD
QVAAKIADLPFALTNAQKRSLDEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYAAYSAGLQSALMVPTEILAEQHYES
LRTLFPELSIALLTSGMKAAVRRSALAAIADGSVDMIVGTHALIQEGVDYHKLGLVITDEQHRFGVKQRRLFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSLIDELPAGRKPIITRWVKHEQLDKVLPWVKEQLKKKAQVYVISPLIEESETLDLKN
AVALEEDLKAYFASSANIALMHGRMKNDEKEAIMQAFKKGSIDILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGEKQSYTILVANPKTDTGKNRMRIMTKTTDGFVLAEEDLKMRGSGEIFGVRQSGIPEFQVADIVEDYPILEEARK
VASQIVAVKDWCQDKRWAILVQNLKQKEILD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=343045 FSA28_RS08750 WP_002291872.1 1739054..1741069(-) (recG/mmsA) [Streptococcus mutans strain UA140]
ATGGACTTACAGTCATCACTTGCGGTTTTAAAGGGATTAGGTCCTAAGTCTGCAGAAAAATTTCATAGATTAGGCATTTA
TACCATTGAGGATTTGTTGCTTTACTATCCTTTTCGTTATGAGGACTTTAAGGCAAAATCTGTTTTAGATTTGTTAGATG
GTGAAAAAGCTGTTGTTACTGGAAAAGTAGTGACCCCAGCTAATGTACAATATTATGGGTTTAAACGCAATCGTCTATCT
TTTAAAATAAAACAAGATGAAGCTGTTATTGCTGTTTCTTTTTTTAATCAGCCTTATTTACAAGATAAGGTGGAGCTTGA
TCAGGATATTGCTATTTTTGGAAAATGGGATCAAAAGAAGTCAGCTCTTACGGGCATGAAGATTTTGGCTCAAGTGACAG
ATGATATGCAGCCTGTTTATCATGTGGCACAAGGAATATCACAGTCAGCTCTGATTAAGGCTATTCAATCTGTTTTTGAT
GCTGGCTATTTACGCTTTTTATCTGAAAATTTACCGCAGATTCTGCTTGATAAATATCGTTTGTTAGACAGACAAACAGC
TACGCGGGCTATGCATTTTCCGAAAGATTTGGAAGAATATAAACAAGCCTTGCGCCGCATCAAATTTGAGGAACTCTTTT
ATTTTCAACTCAATTTACAGGTTCTTAAAGCAAATAATAAATCAGAATCAAATGGTCTGCTTATTACTTATGATCACGAT
CAAGTGGCTGCTAAAATAGCTGATTTGCCTTTTGCCTTGACGAATGCCCAAAAAAGGAGCTTAGACGAAATTCTGGCAGA
TATGAAGTCTGGCGCTCATATGAATCGGCTTTTACAGGGAGATGTTGGTTCTGGTAAGACAGTCATTGCCAGTCTTGCTA
TGTATGCAGCCTATAGTGCAGGTCTGCAGTCTGCTTTGATGGTTCCTACGGAAATTTTAGCGGAACAACATTATGAAAGT
TTAAGGACTTTATTTCCTGAACTTTCAATTGCACTTTTGACGTCTGGAATGAAGGCTGCTGTAAGACGTTCAGCCTTAGC
AGCTATCGCTGATGGCTCAGTAGATATGATTGTTGGTACCCACGCTCTCATTCAAGAAGGTGTTGATTACCATAAATTAG
GCTTAGTTATTACGGATGAACAACATCGATTTGGTGTTAAGCAAAGGCGACTGTTTAGGGAAAAGGGAGAGAATCCTGAT
GTTCTCATGATGACAGCCACACCTATTCCTAGAACCTTGGCTATTACTGCCTTTGGCGAAATGGATGTTTCTCTTATTGA
TGAATTGCCAGCAGGTCGCAAACCGATTATTACACGTTGGGTTAAGCATGAACAGTTAGATAAAGTTCTGCCTTGGGTTA
AAGAACAGCTCAAGAAAAAGGCACAAGTCTATGTCATTTCACCTTTGATTGAGGAGTCTGAAACCTTGGATTTGAAAAAT
GCTGTCGCTTTAGAAGAAGACTTAAAAGCTTATTTTGCGTCGTCTGCTAATATTGCTCTTATGCATGGTCGTATGAAAAA
TGATGAAAAAGAAGCCATTATGCAGGCTTTCAAAAAGGGCAGTATTGATATTCTGGTTTCAACAACTGTCATTGAAGTTG
GGGTCAATGTACCTAATGCTACGATTATGATTATTATGGATGCCGATCGTTTTGGTCTTAGTCAATTGCATCAATTACGA
GGACGTGTAGGACGTGGAGAAAAGCAATCCTATACCATTTTAGTTGCTAATCCTAAAACGGATACTGGGAAAAATCGCAT
GCGCATTATGACAAAAACAACAGATGGCTTTGTTTTGGCTGAAGAAGATTTAAAAATGCGTGGTTCAGGAGAAATTTTTG
GTGTTCGTCAATCTGGCATTCCTGAATTTCAGGTGGCTGATATTGTGGAAGATTACCCTATTTTAGAAGAGGCTAGAAAA
GTGGCTAGTCAAATTGTGGCCGTTAAAGATTGGTGTCAAGATAAACGATGGGCAATTCTTGTGCAAAATCTTAAGCAAAA
AGAAATTTTGGATTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(10-156)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

Helicase conserved C-terminal domain (Helicase_C)

(455-566)

DEAD/DEAH box helicase (DEAD)

(254-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

69.598

100

0.696
  recG/mmsA Streptococcus pneumoniae R36A

69.598

100

0.696
  recG Bacillus subtilis subsp. subtilis str. 168

49.48

100

0.496
  recG Neisseria meningitidis strain C311

39.51

97.317

0.385