Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FSA40_RS04310 Genome accession   NZ_CP044493
Coordinates   849729..850163 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain MD     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 844729..855163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS04280 (FSA40_0844) gdhA 844911..846260 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  FSA40_RS04285 (FSA40_0845) - 846372..846755 (-) 384 WP_002265142.1 DUF3021 family protein -
  FSA40_RS04290 (FSA40_0846) queF 846864..847352 (-) 489 WP_002265143.1 preQ(1) synthase -
  FSA40_RS04295 (FSA40_0847) queE 847365..848081 (-) 717 WP_024785258.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA40_RS04300 (FSA40_0848) queD 848078..848524 (-) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  FSA40_RS04305 (FSA40_0849) queC 848524..849177 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FSA40_RS04310 (FSA40_0850) rcrR 849729..850163 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA40_RS04315 (FSA40_0851) rcrP 850167..851969 (+) 1803 WP_151416273.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04320 (FSA40_0852) rcrQ 851959..853713 (+) 1755 WP_019313596.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04325 (FSA40_0853) tpx 853910..854395 (+) 486 WP_002266461.1 thiol peroxidase -
  FSA40_RS04330 (FSA40_0854) - 854532..855002 (+) 471 WP_002267997.1 hypothetical protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=342901 FSA40_RS04310 WP_002263292.1 849729..850163(+) (rcrR) [Streptococcus mutans strain MD]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=342901 FSA40_RS04310 WP_002263292.1 849729..850163(+) (rcrR) [Streptococcus mutans strain MD]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1