Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FSA40_RS04320 Genome accession   NZ_CP044493
Coordinates   851959..853713 (+) Length   584 a.a.
NCBI ID   WP_019313596.1    Uniprot ID   -
Organism   Streptococcus mutans strain MD     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 846959..858713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS04295 (FSA40_0847) queE 847365..848081 (-) 717 WP_024785258.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA40_RS04300 (FSA40_0848) queD 848078..848524 (-) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  FSA40_RS04305 (FSA40_0849) queC 848524..849177 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FSA40_RS04310 (FSA40_0850) rcrR 849729..850163 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA40_RS04315 (FSA40_0851) rcrP 850167..851969 (+) 1803 WP_151416273.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04320 (FSA40_0852) rcrQ 851959..853713 (+) 1755 WP_019313596.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04325 (FSA40_0853) tpx 853910..854395 (+) 486 WP_002266461.1 thiol peroxidase -
  FSA40_RS04330 (FSA40_0854) - 854532..855002 (+) 471 WP_002267997.1 hypothetical protein -
  FSA40_RS04335 (FSA40_0855) - 855232..855855 (+) 624 WP_002293490.1 GTP pyrophosphokinase family protein -
  FSA40_RS04340 (FSA40_0856) - 855856..856542 (+) 687 WP_002263646.1 response regulator transcription factor -
  FSA40_RS04345 (FSA40_0857) - 856548..857780 (+) 1233 WP_172964886.1 HAMP domain-containing sensor histidine kinase -
  FSA40_RS04350 (FSA40_0858) - 857837..858187 (-) 351 WP_002263648.1 DUF1304 family protein -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64604.61 Da        Isoelectric Point: 5.9195

>NTDB_id=342903 FSA40_RS04320 WP_019313596.1 851959..853713(+) (rcrQ) [Streptococcus mutans strain MD]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKRQFENLNNQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=342903 FSA40_RS04320 WP_019313596.1 851959..853713(+) (rcrQ) [Streptococcus mutans strain MD]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGATAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGGC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAGGCAGTTTGAAAACTTGAATAACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCTTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGTAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-297)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.315

100

0.993