Detailed information NTG0342783

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EUZ85_RS28055
• Genome accession: NZ_CP035490
• Coordinates: 6340990..6342348 (+)
• Length: 452 a.a.
• NCBI ID: WP_127973421.1
• Uniprot ID: A0AAE5XNF1
• Organism: Hahella sp. KA22
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 6335990..6347348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EUZ85_RS28040 (EUZ85_28040)	-	6336666..6337520 (+)	855	WP_241566881.1	outer membrane protein assembly factor BamD	-
EUZ85_RS28045 (EUZ85_28045)	-	6337591..6339219 (-)	1629	WP_206617967.1	NAD+ synthase	-
EUZ85_RS28050 (EUZ85_28050)	-	6339389..6340978 (+)	1590	WP_241566882.1	PAS domain-containing sensor histidine kinase	-
EUZ85_RS28055 (EUZ85_28055)	pilR	6340990..6342348 (+)	1359	WP_127973421.1	sigma-54 dependent transcriptional regulator	Regulator
EUZ85_RS28060 (EUZ85_28060)	-	6342479..6342994 (+)	516	WP_127974603.1	GspH/FimT family pseudopilin	-
EUZ85_RS28065 (EUZ85_28065)	-	6343033..6343467 (-)	435	WP_127973422.1	type IV pilin protein	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 50348.72 Da
• Isoelectric Point: 5.1213

>NTDB_id=342783 EUZ85_RS28055 WP_127973421.1 6340990..6342348(+) (pilR) [Hahella sp. KA22]
MIKKVLIVDDEPDIRALLEITLSRMQIETRAAENITQAKQLLSEESFSLVLTDMNMPDGNGIDLVAHIQKQSSNTPVAVI
TAYGSIDTAISALKAGAFDFVSKPVDLARLRELVNSALKLSKNDAPKIAPQVTQLLGESSTMDKLRGQIRKLARSQAPIY
ISGESGSGKEMVAKSIHEQGPRSEGPFVPVNCGAIPSELMESEFFGHKKGAFTGAVENKVGLFQAANGGTLFLDEVADLP
LTMQVKLLRAIQEKAVRPVGEQKEIPIDVRILSATHKDLHNEVDEGRFRQDLFYRINVIELRVPSLRQRKEDIPLLANHF
LKQLADECEIPNASISKAAMQKLEAYYFPGNVRELENIMERAFTLCEDDVINEEDIHLPKTDMEGSASDAMELDVPEFDE
NKVNLEHFLENIEKQAIEKALEETRWNKTAAAKKLGISFRALRYRLKKLGME

Nucleotide

• Length: 1359 bp

>NTDB_id=342783 EUZ85_RS28055 WP_127973421.1 6340990..6342348(+) (pilR) [Hahella sp. KA22]
ATGATAAAGAAAGTACTCATCGTTGACGACGAACCCGATATTCGCGCGTTACTGGAAATCACTTTAAGCCGCATGCAAAT
CGAAACAAGGGCGGCGGAAAATATTACGCAAGCCAAGCAGTTATTGAGCGAAGAGAGCTTCAGTCTCGTACTGACCGATA
TGAATATGCCGGACGGCAATGGTATCGACCTTGTCGCCCACATCCAAAAGCAGTCATCCAACACCCCTGTAGCGGTGATT
ACAGCTTATGGCAGTATTGATACGGCCATTTCCGCACTTAAAGCCGGCGCTTTTGACTTTGTTTCCAAACCTGTAGATCT
TGCTCGTCTACGCGAGCTCGTTAACAGTGCGCTAAAACTGTCAAAAAATGACGCCCCCAAAATAGCCCCTCAAGTAACCC
AATTGCTCGGTGAATCATCCACGATGGATAAACTTCGCGGGCAAATCAGAAAGCTCGCACGCAGTCAGGCGCCGATTTAT
ATTAGCGGCGAGTCGGGTAGCGGAAAGGAAATGGTGGCCAAATCGATCCATGAGCAAGGGCCGCGAAGCGAAGGTCCCTT
TGTGCCAGTCAACTGTGGCGCTATACCCAGCGAGTTAATGGAAAGTGAATTTTTCGGCCATAAGAAAGGGGCATTTACTG
GCGCAGTTGAAAATAAAGTAGGGTTATTCCAGGCGGCGAATGGCGGGACGCTGTTTCTTGATGAAGTTGCTGACTTGCCT
TTAACCATGCAAGTAAAACTACTGCGTGCGATTCAGGAAAAAGCTGTTCGTCCAGTTGGCGAACAAAAAGAGATTCCAAT
CGATGTACGCATATTGTCCGCCACTCATAAAGATTTGCACAATGAGGTAGATGAAGGCCGGTTCCGCCAAGACCTTTTTT
ATCGAATAAATGTCATCGAGCTGAGAGTCCCAAGCTTGCGTCAACGAAAAGAAGACATCCCGCTTCTCGCCAATCATTTT
CTAAAACAGCTGGCGGATGAATGCGAAATTCCTAACGCCTCAATTAGCAAAGCGGCGATGCAGAAACTGGAGGCTTATTA
TTTTCCAGGTAACGTTCGCGAACTCGAAAATATTATGGAGCGCGCCTTTACCCTGTGCGAAGACGATGTCATTAACGAAG
AGGACATCCACCTGCCTAAAACAGATATGGAAGGTTCAGCATCAGACGCCATGGAGCTGGATGTACCTGAATTCGACGAA
AACAAGGTTAACCTTGAACACTTTCTTGAGAACATAGAAAAGCAGGCTATTGAGAAAGCGCTTGAAGAAACTCGGTGGAA
TAAAACAGCGGCCGCCAAAAAGCTGGGCATCAGCTTTCGCGCCCTGCGCTACCGCCTGAAGAAACTGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (408-449)

• Response regulator receiver domain (Response_reg) (5-114)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	66.446	100	0.666
pilR	Acinetobacter baumannii strain A118	51.739	100	0.527
luxO	Vibrio cholerae strain A1552	37.444	98.673	0.369